Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2661 ATGGTAAGAGCTCCTTGTTGTGAAAAGATGGGATTGAAGAGGGGTCCTTGGTCTCTTGAGGAAGATGAAATCCTTACATCTTACATCCAAAAACATGGCCATGGCAATTGGCGTGCCCTCCCAAAGCTTGCAGGCTTGTTAAGGTGTGGAAAAAGCTGCAGACTTAGGTGGATTAACTATTTGAGACCAGATATTAAGAGAGGAAATTTCACAAATGAAGAAGAGGAAAATATCATTAAGCTGCATGAAATGCTTGGAAATAGGTGGTCGGCAATTGCAGCAAAACTACCAGGAAGAACGGATAATGAAATAAAAAATGTGTGGCACACGCATTTGAAGAAGAAGCTAAACCAAACAAACTCAGAAGCTAAGAAAAAGGCGATCTCAAAACCAAAAATCAAACGTTCTGATTCGAATTCAAGCACAATAACACAATCAGAATCAGCATCTGCATGCACTACTAGTTCTAGTGATTTTTCATCTGTCACAGTTGGTGAAAGAAAGGATATAAAAAGTGAAGACATTGAGTCTATGGAAGAAACAATGGCTGTAATTGATGAGAGTTTTTGGTCAGAAGCAGCAGCATTGGATGAAACTTCAACTGATATGAAATCAAGTTCATTAACAATCTCAAATGAAATGTTGCCACTTCAATACCCTGATGAAATTCTTCCAGAAAGTCATGAAGATTATAATTCTAACATGGATGATGGCATGGATTTTTGGTATGATATATTTATTAGGACTGGAGATCAAATAGAATTGCCTGAGTTTTGA 777 0.3745 MVRAPCCEKMGLKRGPWSLEEDEILTSYIQKHGHGNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTNEEEENIIKLHEMLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKKLNQTNSEAKKKAISKPKIKRSDSNSSTITQSESASACTTSSSDFSSVTVGERKDIKSEDIESMEETMAVIDESFWSEAAALDETSTDMKSSSLTISNEMLPLQYPDEILPESHEDYNSNMDDGMDFWYDIFIRTGDQIELPEF* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2661 258 CDD SANT 69 112 IPR001005 -
Mtr1g2661 258 SMART sant 13 63 IPR001005 -
Mtr1g2661 258 SMART sant 66 114 IPR001005 -
Mtr1g2661 258 CDD SANT 16 61 IPR001005 -
Mtr1g2661 258 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mtr1g2661 258 Gene3D - 14 66 - -
Mtr1g2661 258 Gene3D - 68 151 - -
Mtr1g2661 258 PANTHER TRANSCRIPTION FACTOR MYB30-LIKE 1 250 - -
Mtr1g2661 258 MobiDBLite consensus disorder prediction 119 173 - -
Mtr1g2661 258 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 250 - -
Mtr1g2661 258 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mtr1g2661 258 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mtr1g2661 258 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mtr1g2661 258 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mtr1g2661 258 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Mtr1g2661 258 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mtr1g2661 258 MobiDBLite consensus disorder prediction 134 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2661 Mtr-Chr1 37651100 37653962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2661 1 258 MYB Transcription Factor Family AT2G31180 51.128 1.28e-82 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr1g2661 Myb_DNA-binding 2.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2661 K09422 - gmx:100807569 373.629