Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2653 ATGATGGATCATGTTATTGGTGGAAAATTCAAGCTTGGAAGGAAAATCGGTGGTGGGTCATTTGGAGAGCTTTACTTGGGTGTTAATATACAAACTGGAGAGGAAGTTGCTCTTAAATTGGAACCTGCAAAGACCAAACATCCTCAACTTCACTATGAGTCAAAATTGTACATGCTTCTTCAAGGGGGAACGGGTATTCCCCATTTAAAATGGTTTGGAGTTGAGGGTGACTACAATGCCATGGCAATTGACCTCCTTGGACCAAGTCTGGAAGACTTGTTTAACTATTGCAATAGGAAATTCTCTCTAAAAACAGTTCTGATGCTTGCAGATCAGCTACTAAACAGAGTTGAGTACATGCACTCCCGGGGTTTCCTTCACCGTGATATAAAGCCTGACAACTTTTTAATGGGTTTAGGCCGCAAAGCAAATCAGGTATACATAATTGATTATGGCCTTGCGAAAAAGTTCCGAGATCTTCACACACACAAGCATATACCATATAGGGAAAACAAAAACCTCACTGGAACTGCCCGGTATGCGAGTGTTAATACTCATCTAGGAGTTGAACAAAGCAGAAGAGATGATCTGGAATCGCTTGGTTTTGTCCTCATGTACTTTTTGAGAGGAAGTCTCCCTTGGCAAGGTTTGAAAGCTGGCAATAAAAAACAAAAATACGACAAGATAAGTGAAAAGAAGATGCTTACTCCTGTAGAGGTTTTGTGCAAGTCACATCCGTTGGAATTTACATCATACTTCCATTACTGCCGATCGTTGCGGTTTGAAGATAAGCCTGATTATTCATATCTCAAGAGACTCTTTCGTGACCTATTCATCCGAGAAGGCTATCAGTTTGATTATGTGTTCGATTGGACTATATTGAAGTATCCACAAATTGGATCTAGTTCCAGAGCCCGGCCAAGTGGGAAACCAGTCATAAATCCAGGACAATCAGGAGAGAGAGTAGAACGGCCTTCAGGTGGACCAGAGATTCGGGATAGATTCTCGGGTGCAGTTCAGGCATTTGCAAGAAGGAATGGATCTGGCCATGGTGTGCATGGTGATCATTCCAGGCATAGATCTTCAGATGAGCCATCTTCTAAAGACGTGCAAGCTGATTCTGAGAGGCCACGTAGCTCTTCTCGTCATGGCAGTTCCTCCAAAAGACCTGTCTTATCAAGCAGCCGTCCAAACTCTTCTGGTGAACCGAGTGAAAGCCGCTCTAGCCGATTGCTCTTAAGCAGTAGCAGACTATCTACTACTCAGAGGACTCAACCAGGTCTTGAGTCCAAATCATCATCATTTAATAATCGTGCTTCTGGGGCAAGAGGTGGTCGTGATGATACCCTCAGGAGCTTTGAACTCCTGTCACTTGGCACAGGAAAAAGGAAATGA 1395 0.4344 MMDHVIGGKFKLGRKIGGGSFGELYLGVNIQTGEEVALKLEPAKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNAMAIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLLNRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKFRDLHTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGFVLMYFLRGSLPWQGLKAGNKKQKYDKISEKKMLTPVEVLCKSHPLEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRARPSGKPVINPGQSGERVERPSGGPEIRDRFSGAVQAFARRNGSGHGVHGDHSRHRSSDEPSSKDVQADSERPRSSSRHGSSSKRPVLSSSRPNSSGEPSESRSSRLLLSSSRLSTTQRTQPGLESKSSSFNNRASGARGGRDDTLRSFELLSLGTGKRK* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2653 464 CDD STKc_CK1_delta_epsilon 9 283 - -
Mtr1g2653 464 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Mtr1g2653 464 SUPERFAMILY Protein kinase-like (PK-like) 5 291 IPR011009 -
Mtr1g2653 464 PANTHER CASEIN KINASE I-LIKE PROTEIN 2 451 - -
Mtr1g2653 464 MobiDBLite consensus disorder prediction 349 382 - -
Mtr1g2653 464 Gene3D Transferase(Phosphotransferase) domain 1 1 323 - -
Mtr1g2653 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Mtr1g2653 464 PANTHER CASEIN KINASE-RELATED 2 451 - -
Mtr1g2653 464 ProSiteProfiles Protein kinase domain profile. 10 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2653 464 MobiDBLite consensus disorder prediction 345 451 - -
Mtr1g2653 464 MobiDBLite consensus disorder prediction 301 332 - -
Mtr1g2653 464 Pfam Protein kinase domain 11 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2653 464 SMART serkin_6 10 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2653 464 MobiDBLite consensus disorder prediction 384 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2653 Mtr-Chr1 37543051 37550788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2653 9 214 MAP Kinase Kinase Kinase AT3G06030 25.926 8.45e-14 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mtr1g2653 Pkinase 4.8e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2653 K08960 - jre:108991207 788.489