Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2648 ATGAGAATCAGACATCTTCATCTCAAGCTCAAGGCATTTAGGTTGAGAAGGTTTCTGCTAAGATTTCTAGGAAGGAAGAGAAGGCTCATGCCAGCAAAGAAGCCTTCATGGATGACACCAGTAACACATGGTTATCAAGTGGTGGAGCATCATATGATCAAAGATGGTTCTGATTACTCAGATTTTGATTCAGTTGTGGTACAGAGAGAGCAAATGGATCAAACAGAATTGTGGTATTTTGGAATCTTTGATCCACTAGTTGGAGACAAGGTTACCAAGTACATGCAATCCTATTTCTTTGCTAAGAAGCTTCAAGAGGCTCAAATATGGAGAAAAAGCAAAGAAATGATGAAGAGAGCTTATCTAGGTGTAAGGGCAAAGATGAGAGAAGAACATAGATATGAAGAGACATGTAGAATGGGTTCAGCATCTGTTATGGTAATCAATGGAGAAAAACTTGTAATAGCTAATATAGGCAATTACAGAGTTGTTGTGTGTAAAGATGGAATGGCTCACCAGAAAACTGACACATACCAACAATCAGCCAAAAGACATTGGTCTCGCAGAATATTTTCAGCATATGAATCAGGAAATGCAGTAGCTAACAGGCAATCTAGCAGCTCAGAACTTGTCATCAGAAGTGAAAGTATTGATTCTGATACTGAATTTTTGATACTAGCAAGCAATGGCATATGGGAGGTGATGAAGAATCAAGAAGCTGTGAATCTAATAAGTCACATAGAGGATCCACAAGAAGCAGCTGAATGCTTAGCAAATGAAGCTTTAAATAGAATGAGCAAAAGCAATATCTCATGCTTAATCATTCGTTTTGACTGA 837 0.3811 MRIRHLHLKLKAFRLRRFLLRFLGRKRRLMPAKKPSWMTPVTHGYQVVEHHMIKDGSDYSDFDSVVVQREQMDQTELWYFGIFDPLVGDKVTKYMQSYFFAKKLQEAQIWRKSKEMMKRAYLGVRAKMREEHRYEETCRMGSASVMVINGEKLVIANIGNYRVVVCKDGMAHQKTDTYQQSAKRHWSRRIFSAYESGNAVANRQSSSSELVIRSESIDSDTEFLILASNGIWEVMKNQEAVNLISHIEDPQEAAECLANEALNRMSKSNISCLIIRFD* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2648 278 SUPERFAMILY PP2C-like 65 278 IPR036457 -
Mtr1g2648 278 Pfam Protein phosphatase 2C 204 270 IPR001932 -
Mtr1g2648 278 Pfam Protein phosphatase 2C 76 180 IPR001932 -
Mtr1g2648 278 SMART PP2C_4 49 275 IPR001932 -
Mtr1g2648 278 CDD PP2Cc 63 277 IPR001932 -
Mtr1g2648 278 PANTHER ALPHABET, ISOFORM E-RELATED 6 277 - -
Mtr1g2648 278 Gene3D - 59 278 IPR036457 -
Mtr1g2648 278 ProSiteProfiles PPM-type phosphatase domain profile. 59 277 IPR001932 -
Mtr1g2648 278 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 6 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2648 Mtr-Chr1 37472837 37475208 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2648 1 277 PP2C-type Phosphatase Gene Family AT3G23360 50.000 9.02e-87 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2648 K19704 - gmx:100785227 394.045