Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2647 ATGCCGTTCAAGAGGTTTGTTGAGATCGGAAGAGTTGCACTTGTCAACTATGGCCCAGATTATGGCAAGCTCGTTGTCATCGTTGATGTTATCGACCAAACTAGGGCTCTTGTTGATGCACCTGACATGGAGAGAGTCCCAATCAATTTCAAGAGGCTTTCTCTAACTGATATCAAGATTGATATCAAGAGGGTTCCTAAGAAGAAGGATCTCGTCAAAGCCATGGAAGCTGCAGATGTGAAGAACAAGTGGGAGAAGAGCTCCTGGGGAAGGAAATTGATTGTTAAGAAGAGGAGGGCTGCCCTTAACGATTTTGATAGGTTCAAGATTATGTTGGCAAAGATTAAGAGGGCTGGTGTTGTTAGGCAAGAACTTGCTAAGCTGAGGAAGACCGCAGCTTAG 402 0.4478 MPFKRFVEIGRVALVNYGPDYGKLVVIVDVIDQTRALVDAPDMERVPINFKRLSLTDIKIDIKRVPKKKDLVKAMEAADVKNKWEKSSWGRKLIVKKRRAALNDFDRFKIMLAKIKRAGVVRQELAKLRKTAA* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2647 133 PANTHER 60S RIBOSOMAL PROTEIN L14 1 133 IPR039660 GO:0003723|GO:0003735
Mtr1g2647 133 Gene3D - 1 84 IPR014722 -
Mtr1g2647 133 Pfam Ribosomal protein L14 45 117 IPR002784 GO:0003735|GO:0005840|GO:0006412
Mtr1g2647 133 SUPERFAMILY Translation proteins SH3-like domain 5 93 IPR008991 -
Mtr1g2647 133 Gene3D - 92 127 - -
Mtr1g2647 133 PANTHER RIBOSOMAL PROTEIN L14, PUTATIVE-RELATED 1 133 - -
Mtr1g2647 133 CDD KOW_RPL14 7 79 IPR041985 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2647 Mtr-Chr1 37468472 37469853 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2647 1 133 Cytoplasmic Ribosomal Protein Gene Family AT2G20450 84.962 3.43e-78 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2647 K02875 - sly:101252219 229.95