Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2641 ATGGAGAAACCTGGTGAGACAATCGCAGTAGTGTTATCTGCGAAGGAAGCATTCGAGAAGCTCGAGAAAGTTGGAGAAGGAACGTACGGGAAGGTTTACAGAGCAAGAGAGAAAGCTACTGGGAAAATTGTTGCGTTGAAGAAGACTCGTCTTCATGAAGATGATGAAGGTGTTCCTCCTACTACGCTTCGCGAGGTTTCGATTCTGAGAATGCTCTCTCGCGATCCACATGTTGTTAGGTTGTTGGATGTGAAACAAGGGCAGAACAAAGAAGGGAAAACTGTGTTGTATTTAGTTTTTGAGTATATGGATACTGATCTTAAGAAATTCATTCGGAGTTTTCGTCAAACTGGGCAAAATATTCCACCCCCAACCATCAAAGGTTTGATGTATCAACTTTGCAAGGGTGTTGCTTTCTGCCATGGTCATGGAATTTTGCACAGGGATTTGAAGCCTCACAATCTCTTGATGGACCGGAAAACAATGATGCTCAAAATTGCTGATCTTGGACTTGCTAGAGCTTTTACTGTACCACTTAAGAAGTACACTCATGAGATACTAACCCTGTGGTATAGAGCACCTGAAGTCCTTTTGGGGGCTACCCATTACTCAATGGCTGTGGATATGTGGTCTGTTGCCTGCATTTTCGCTGAACTTGTTACCAAGACAGCACTATTTCCTGGTGATTCTGAGCTGCAACAACTCCTCCATATATTCAGGCTGTTGGGGACTCCTAATGAAGATGTGTGGCCAGGTGTTAGTAAACTAATGAACTGGCATGAGTACCCTCAGTGGGGTCCTCAAAGTCTTTCAAAGGCTGTTCCCGGTTTGGAAGAGACTGGAGTGGATTTACTCTCTCAAATGCTGCAGTATGAACCTTCCAAGCGGCTATCTGCAAAGAAAGCTATGGAACACCCTTACTTTGATGACCTAGACAAGACCTATCTCTAG 951 0.4416 MEKPGETIAVVLSAKEAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLLDVKQGQNKEGKTVLYLVFEYMDTDLKKFIRSFRQTGQNIPPPTIKGLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMMLKIADLGLARAFTVPLKKYTHEILTLWYRAPEVLLGATHYSMAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEDVWPGVSKLMNWHEYPQWGPQSLSKAVPGLEETGVDLLSQMLQYEPSKRLSAKKAMEHPYFDDLDKTYL* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2641 316 PANTHER CELL DIVISION PROTEIN KINASE 11 314 - -
Mtr1g2641 316 Pfam Protein kinase domain 18 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2641 316 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Mtr1g2641 316 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Mtr1g2641 316 SUPERFAMILY Protein kinase-like (PK-like) 14 312 IPR011009 -
Mtr1g2641 316 Gene3D Phosphorylase Kinase; domain 1 13 104 - -
Mtr1g2641 316 Gene3D Transferase(Phosphotransferase) domain 1 106 315 - -
Mtr1g2641 316 SMART serkin_6 18 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2641 316 ProSiteProfiles Protein kinase domain profile. 18 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2641 316 PANTHER - 11 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2641 Mtr-Chr1 37402525 37404607 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2641 11 316 Core Cell Cycle Gene Families AT1G20930 85.342 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Mtr1g2641 Pkinase 1.3e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2641 K07760 - gmx:547738 588.186