Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2632 ATGAATTATTCAAGTGAAGAAGGTGATGATGGATATGATCAAGGAAAAAGACGTTCTTATGAATGCACATTTTGCAAAAGAGGATTCACAAATGCACAAGCTTTAGGTGGTCACATGAATATTCATAGGAAAGATAGAGCTAAGGCTAGTAAGCAACCAAATTCTTCTTCATCACAAATTGGAACTAAATTCTACACCAATGATGAAACTATGGTCTTTCCTTTTGCTTCAGAACAAAATTCCTTTATTGGAAATTACCAACCTTCAAATATGCATGGTTATTCATATGAACAACCAAGATCATATGAATATCCGACAGCACCAAATTACCATGTTGGAAATTACCAAACTTCAAATGTGCATGGTTTTTCTTATGATCAGCAAGGATCGTCGAATTGGCCTAATTTCCATCTGAACCAAGAGCTTCAAGGACCTGACTTGAGTCTTCAAATCGGCTCAACTCAACATTATGTTGATGATACTCATCATCAAAGAATTAGGAGAGGAAATGATCAGGAGGATATTGAAGTGGACTTGGAGCTAAGGCTTGGGCAGGATTCAAGATTTATATCATAG 576 0.3628 MNYSSEEGDDGYDQGKRRSYECTFCKRGFTNAQALGGHMNIHRKDRAKASKQPNSSSSQIGTKFYTNDETMVFPFASEQNSFIGNYQPSNMHGYSYEQPRSYEYPTAPNYHVGNYQTSNVHGFSYDQQGSSNWPNFHLNQELQGPDLSLQIGSTQHYVDDTHHQRIRRGNDQEDIEVDLELRLGQDSRFIS* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2632 191 PANTHER OS07G0101800 PROTEIN 7 187 - -
Mtr1g2632 191 Gene3D Classic Zinc Finger 10 80 - -
Mtr1g2632 191 Pfam C2H2-type zinc finger 20 44 - -
Mtr1g2632 191 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 7 187 - -
Mtr1g2632 191 ProSitePatterns Zinc finger C2H2 type domain signature. 22 42 IPR013087 -
Mtr1g2632 191 SUPERFAMILY beta-beta-alpha zinc fingers 17 46 IPR036236 -
Mtr1g2632 191 SMART c2h2final6 20 42 IPR013087 -
Mtr1g2632 191 ProSiteProfiles Zinc finger C2H2 type domain profile. 20 47 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2632 Mtr-Chr1 37326908 37327483 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2632 20 60 C2H2 Transcription Factor Family AT5G43540 68.293 1.70e-15 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr1g2632 zf-C2H2_6 2e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2632 - - cam:101503281 173.711