Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2608 ATGGCAGGACAACTAGGAGTGCTTAATGCACTCGATGTGGCGAAGACACAAATGTACCATTTCACAGCAATTGTGATTGCTGGAATGGGTTTTTTCACTGATGCCTATGATCTCTTTTGCATTTCCCTTGTCACAAAATTGTTAGGACGAATCTATTACACAGATCCTACCCAACCAAAGCCAGGTGTTCTTCCTCCCGGTGTACAAGCTGCGGTAACTGGTGTTGCCCTAGTCGGCACTTTGTCTGGCCAACTTTTCTTCGGTTGGCTTGGTGACAAATTAGGAAGGAAAAAAGTTTATGGTATAACCCTTATGCTTATGGTAGGTTGTTCGCTCGCCTCAGGTCTATCTTTTGGAAATAGTCCAAAGGGTGTCATGGCAACACTTTGTTTCTTCAGGTTTTGGCTTGGTTTTGGAATTGGTGGTGATTACCCTCTTTCTGCTACAATTATGTCTGAGTATGCGAACAAGAAGACGCGAGGAGCTTTTATCGCTGCAGTGTTTGCTATGCAAGGATTTGGAATCATGGCTGGTGGAGTATTTGCATTGATTGTAGCTGCTGCTTTTGATCACAAATATCAAGTTCCTACTTATGAAGAAAACGCGAAAGCGTCGCTTGTGTTACCGGCTTTTGATTACGTTTGGCGTATTATTTTGATGTTTGGTGCTGTTCCGGCAGCACTTACCTATTACTGGCGTATGAAGATGCCTGAGACAGCTCGTTACACGGCACTTGTTGCTAAGAATGGTAAACAAGCTGCTTCTGATATGTCTAAGGTGTTACAAGTTGAAATTGAAGCTGAAGAGGAAAAAGTGCAAAATTTGGCTGAGAATCAAAACCAAAAGTTTGGTCTTTTTACCAGACAATTCGCAAAACGACACGGATTGCACTTGTTGGGAACAACAACTACTTGGTTCTTGTTGGACATTGCTTTCTACAGTCAGAATCTTTTTCAAAAGGATATTTTCACCGCGATTGGGTGGATCCCTCCAGCAAAAGAAATGAATGCAATTAACGAACTGTATAGGATTGCAAGAGCACAAACCCTTATAGCATTGTGCAGTACAGTGCCAGGTTACTGGTTTACAGTGGCATTTATCGATTACATGGGTCGTTTTGCGATCCAATTGATGGGTTTCTTCTTCATGACCGTCTTCATGTTTGCTCTAGCTATACCTTATGATCATTGGACTAAGAAAGAAAACAGAATTGGGTTTGTTGTAATGTACTCATTAACTTTCTTTTTTGCCAATTTCGGTCCAAATGCTACCACATTTGTTGTTCCAGCCGAGATTTTCCCGGCAAGGCTTAGATCTACCTGTCACGGAATCTCAGCTGCTGCAGGAAAGGCTGGAGCAATTGTTGGTGCATTTGGATTTTTATATGCTGCACAAAGTAAGGATCCGACGAAGACTGATCATGGTTACCCAACTGGTATTGGTATCAAGAACTCCCTCATTGTGCTTGGTGTTGTCAACTTCTTTGGAATGGTATTCACCTTCTTAGTACCTGAACCAAATGGAAAATCATTGGAAGAGATGAGTGGTGAGAACGAAGATGACGATGCTGAGGCTATTGAGATGGCAGCAGGGTCTGCTAGGACAGTACCTGTTTAA 1617 0.4242 MAGQLGVLNALDVAKTQMYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYTDPTQPKPGVLPPGVQAAVTGVALVGTLSGQLFFGWLGDKLGRKKVYGITLMLMVGCSLASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGIMAGGVFALIVAAAFDHKYQVPTYEENAKASLVLPAFDYVWRIILMFGAVPAALTYYWRMKMPETARYTALVAKNGKQAASDMSKVLQVEIEAEEEKVQNLAENQNQKFGLFTRQFAKRHGLHLLGTTTTWFLLDIAFYSQNLFQKDIFTAIGWIPPAKEMNAINELYRIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQLMGFFFMTVFMFALAIPYDHWTKKENRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKTDHGYPTGIGIKNSLIVLGVVNFFGMVFTFLVPEPNGKSLEEMSGENEDDDAEAIEMAAGSARTVPV* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2608 538 Gene3D MFS general substrate transporter like domains 272 530 IPR036259 -
Mtr1g2608 538 Gene3D MFS general substrate transporter like domains 19 267 IPR036259 -
Mtr1g2608 538 CDD MFS_PhT 24 506 - -
Mtr1g2608 538 SUPERFAMILY MFS general substrate transporter 12 515 IPR036259 -
Mtr1g2608 538 PANTHER HIGH AFFINITY INORGANIC PHOSPHATE TRANSPORTER 3 530 - -
Mtr1g2608 538 Pfam Sugar (and other) transporter 24 515 IPR005828 GO:0016021|GO:0022857|GO:0055085
Mtr1g2608 538 Coils Coil 251 282 - -
Mtr1g2608 538 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 508 IPR020846 GO:0022857
Mtr1g2608 538 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 3 530 - -
Mtr1g2608 538 TIGRFAM 2A0109: phosphate:H+ symporter 10 517 IPR004738 GO:0005315|GO:0006817|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2608 Mtr-Chr1 37046745 37050632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2608 1 522 Inorganic Solute Cotransporters AT3G54700 81.071 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2608 K08176 - gmx:100780201 917.531