Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2592 ATGGAGCAAAAAATATTTTCTCCTCTGCTTGGATTCAAGAAGTTCAAGCCACACTTGATCATGGTCTTAGCCCAAGTTGGCTATACCTTCTTATATTTTATCAGTGAAGCTTCCTTCAATCATGGAATGAGTCCTTATGTTTATGTTACATATCGACATATTTTCGCCGGTGTTGTGATGCTCCCTTTTGCGTACTTTCTTGAGAGAAAAGTAAGACCCAAGCTGACTTTTGCTCTTTTTATGGAAATTTCTGTGCTTTCTTTGTTAGGGATCACCATGGCACTCAATTTGTATTTTGCAAGCTTAAAGTATACTTCTCCAACCTTTCTTGCTTCCATGTTCAATACCATAGCTTCCCTTACCTTCATTATTGCAGTGGCACTCAGGTTTGAAGTTATTGATATTAAAAATCCACGTGGAATTGCAAAAGTACTTGGGACCTTGACATCCTTAACTGGTGTTATGACCATGACACTATACAAGGGACCTATTATGAGAAATTTGTGGAGTCCTCTAATCCATATTCAACCAAAAAGTGCTTCTGTTAGTGAGAGTGGGTTAAAGGGTTCACTTATTACAGTTTTATGCTGTGTCACGTTTTCTATATGGTACATTATGCAGGCATCAACTCTAAAAAGATATCCAGCACAATTATCACTCACTACATGGATGTGCTTTATGGGAGCAGCACAATCAGCCATTTTCACAATAATAGTAGAACATAATAACCCTTCAGCATGGATTATAGGATTCAACATTGACTTGTGGTCCATAATATATGGGGGAATTGTTGCTGGTGGTTTGTTGATCTACATTCAACTATGGTGCACTGAGAAAAAAGGACCAGTTTTTGTCACAATGTTTAACCCTCTTTGTACCATATTTGTGACAATTCTAGCATACTTCGTCTTTGGTGAAAAACTTTATTTGGGCAGCATCATAGGTGGTTTTATTGTCATCGTGGGTCTATATTTGTTGCTGTGGGGTAAAGAAGGTGACAAAGATGTTGATTTCAAGACCAAGCAGTGCAATAGTGAAGACCCAGAATGCATAGTATAA 1059 0.3787 MEQKIFSPLLGFKKFKPHLIMVLAQVGYTFLYFISEASFNHGMSPYVYVTYRHIFAGVVMLPFAYFLERKVRPKLTFALFMEISVLSLLGITMALNLYFASLKYTSPTFLASMFNTIASLTFIIAVALRFEVIDIKNPRGIAKVLGTLTSLTGVMTMTLYKGPIMRNLWSPLIHIQPKSASVSESGLKGSLITVLCCVTFSIWYIMQASTLKRYPAQLSLTTWMCFMGAAQSAIFTIIVEHNNPSAWIIGFNIDLWSIIYGGIVAGGLLIYIQLWCTEKKGPVFVTMFNPLCTIFVTILAYFVFGEKLYLGSIIGGFIVIVGLYLLLWGKEGDKDVDFKTKQCNSEDPECIV* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2592 352 SUPERFAMILY Multidrug resistance efflux transporter EmrE 223 330 - -
Mtr1g2592 352 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 160 - -
Mtr1g2592 352 PANTHER WAT1-RELATED PROTEIN 15 344 - -
Mtr1g2592 352 PANTHER WAT1-RELATED PROTEIN 15 344 IPR030184 GO:0016021|GO:0022857
Mtr1g2592 352 Pfam EamA-like transporter family 188 327 IPR000620 GO:0016020|GO:0016021
Mtr1g2592 352 Pfam EamA-like transporter family 19 142 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2592 Mtr-Chr1 36841532 36843646 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2592 16 336 Nodulin-like Gene Family AT5G07050 42.296 5.62e-91 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2592 - - gmx:100527877 542.347