Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2589 ATGGAGAAAAAAGTATTTTCTCCTCTACATGTATACAAAGAGTTCAAGCCACACCTGGTCATGGTTTTAGCCCAAGTTGGCTATACCTTTTTATATTTTATCTCTGAATCTTCCTTCAATCATGGAATGAGTCCTTATGTTTATGTTACCTATCGGCATGTTCTCGCTGGGGCTGTGATGTTTCCTTTTGCATACTTTCTTGAGAGAAGTTTAAGACCAAAGCTGACACTTGTTCTTTTTATGGAAATATTTGTGCTTTCTTTGTTAGGGATCACCATGGCACTCAATTTGTACTTTGCAAGCTTAAAGTATACTTCTCCAACCTTTCTTGCTTCCATGTTCAACACCATTGCTTCCATTACCTTCATTATTGCAGTGGCACTCAGGATCGAGGTTATTGATCTTAGAAATCCACGTAGCATAGCAAAAATACTGGGGACCTTGATATCCTTAGCTGGTGTTTTGACCATGACACTATACAAAGGACCTGTTATGAGAAACTTGTGGCATCCTCTAATTCATATTATTCAACGAAAAAGTTCTTCTATCAACGAGAGTGGATTAAAGGGTTCACTTCTTACTATCTCATGTTGTGCCACTTTTTCTATATGGTACATTATGCAGGCATCTACTCTAAAAAGATATCCTGCTCAATTATCACTCACTACATGGATGTGCTTTATGGGAGCAATACAATCAGCTGTTTTCACATTAATAGTAGAACATAATAACACTTCAGCTTGGATTATAGGACTCAACATTGACTTGTGGTCCATAATATATGGAGGAATTGTTGGTGGTGGTTTATTGATCTACATTCAATTATGGTGCACTGAGAAAAAAGGGCCTGTTTTTGTCACTGTATTTAACCCTCTTTGTACCATATTTGTGGCAATTCTAGCATACTTCGTCCTTGGTGAAAAACTTTATCTGGGCAGCATCATAGGTGCATTTATTGTGATCATGGGTTTGTATCTGTTGCTGTGGGGGAAAGAAGGTGACAAAGAGGTTGATTTCAAGACCAAAGTTAAATTGCAGTACAAAAATGGAGAAGGAGGCTTAGAAGAATGTTGA 1074 0.3771 MEKKVFSPLHVYKEFKPHLVMVLAQVGYTFLYFISESSFNHGMSPYVYVTYRHVLAGAVMFPFAYFLERSLRPKLTLVLFMEIFVLSLLGITMALNLYFASLKYTSPTFLASMFNTIASITFIIAVALRIEVIDLRNPRSIAKILGTLISLAGVLTMTLYKGPVMRNLWHPLIHIIQRKSSSINESGLKGSLLTISCCATFSIWYIMQASTLKRYPAQLSLTTWMCFMGAIQSAVFTLIVEHNNTSAWIIGLNIDLWSIIYGGIVGGGLLIYIQLWCTEKKGPVFVTVFNPLCTIFVAILAYFVLGEKLYLGSIIGAFIVIMGLYLLLWGKEGDKEVDFKTKVKLQYKNGEGGLEEC* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2589 357 Pfam EamA-like transporter family 19 157 IPR000620 GO:0016020|GO:0016021
Mtr1g2589 357 Pfam EamA-like transporter family 189 328 IPR000620 GO:0016020|GO:0016021
Mtr1g2589 357 PANTHER WAT1-RELATED PROTEIN 15 346 IPR030184 GO:0016021|GO:0022857
Mtr1g2589 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
Mtr1g2589 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 224 331 - -
Mtr1g2589 357 PANTHER WAT1-RELATED PROTEIN 15 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2589 Mtr-Chr1 36806966 36809431 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2589 16 337 Nodulin-like Gene Family AT5G07050 43.072 5.43e-90 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2589 - - gmx:100527877 534.643