Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2582 ATGGTAAAAGCAATAGTATCTGTGCTGTTGATTGCCTCTATCCTCTTGTGTGTATCTGCAACAACAGATAATGAATTTCCTAGATGTAATTGTGATGATGAGACCAGTTTCTGGACTATTGAGAGTATTTTGGAGTGTCAAAGAGTTGGTGATTTCTTGATTGCTGTGGCCTACTTCTCAATCCCTCTTGAGCTGCTTTATTTTGTCAGTTGCTCGAACGTCCCTTTCAAATGGGTCCTTGTTCAGTTCATTGCTTTTATAGTACTATGTGGATTGACACATTTTTTGAATGGTTGGACTTATGGTCCTCACACTTTTCAGCTTATGGTGGCACTTACCATCTTTAAGATTCTCACCGCCTTGGTGTCTTGTGCAACTGCGATAACACTTGTCACTTTGATTCCTTTGCTTCTCAAAGTGAAGGTCAGGGAATTCATGCTCAAGAAAAAGACATGGGATCTTGGACGGGAGGTTGGTCTTATTATGAAGCAAAAGGAGGCTGCAATGCATGTAAGAATGCTTACTCAAGAGATTCGGAAATCCCTCGATAGACATACTATTCTGTATACTACTTTGGTGGAGCTTTCGAAAACATTAGGTTTGCAAAATTGTGCTGTGTGGATGCCAAATGAAGAAAAGACAGTGATGAATCTCACTCATGAATTGAACGCAAGGAACTTGGATATTTCTATACCGATTACTGATCCAGATGTTGTAAAAATTAAGGGAAGCAATGGAGTGAATATACTTAGCTCTGAATCAGCGCTTGCTGTTTCCAGTGTTGGTGTTTCTGGTGACGCAGGTCCGGTTGCTGCAATTCGAATGCCAATGTTACGTGTTTGTAATTTTAAAGGAGGAACACCTGAGCTAACTCAGGCTTGTTATGCAATATTGGTCTTGATTCTTCCGGCCGAAGAACCTAGATCTTGGAGCAATCAGGAGCTGGAGATAATTAAGGTGGTTGCTGATCAGGTCGCCGTGGCTCTATCACATGCTGCAATTCTTGAAGAGTCTCAACTCATGAGAGAGAAGTTGGAAGAACGCAATCGAGCTTTGCAACTGGCGAGAAGGAATGCTATGATGGCAAGCCAGGCAAGAAACTCATTTCAGAAAGTCATGAGTGATGGTATGAGGAGGCCTATGCACTCGATTTTGGGATTGCTTTCAATGATACAAGACGATAATTTAAAGAATGAACAGAAGCTTATTGTGGATGCAATGTTAAAGACGAGCAATGTCCTATCAAACTTGATAAATGATGCCATGGACAGCTCTGCAAAGGATGATGGAAGATTTCCTTTGGAGATAAGGTCTTTTGGGTTACATTCCATGATAAAAGAAGCAGCGTGCCTTGCCAAATGCATGTGTGTTTATAAGGGCTTGGGTTTTATGGTTGAGGTTGATAAGTCTTTACCAAACCATGTTATGGGTGATGAGAGGAGGGTTTTTCAGGTGATTTTGCATATGGTTGGGAATCTACTGGATTGTAACCATGGGGAAGGGGGGATCCTAGTATTTCGGGTTTCGGCAGATGCTGGAAGTCAAGGGAGGAATGAAAAAGGATGGGCAACCTGGAGACCAAGCTCATCTAGCGGTGATGTAAATATTAGATTTGAGATAGGGATCAACGGTAGTGATTCTGAAGTTGGGAGCTCAGTGTCCTCAGGTCCTGGGGGTCGGACATATACCAGCGATAGATATGAGGGCAGATTGAGCTTTAGTATTTGCAAGAGGATAGTCCAGTTGATGCAAGGAAACTTATGGTTGGTACCATATACTCACGGTATTCCTCAAAGCATGACACTTCTTCTTCGGTTTCAATTACGGCCTTCCATTGCAATAGCCATCTCTGAACCCGGAGAATCTTCAGAACGCAACTACTCAAATTCATTGTTGAGAGGTCTGCAAGTTCTGTTGGTTGACAACGACGATGTAAATAGAGCAGTGACACAAAAACTGCTTCAGAAACTAGGTTGTTCCGTGACTTCCGCTTCTACAGGATTCGAATGCCTTACTGTCATTGGACCTGTCGGATCTTCCATTCAAGTCATTCTTTTGGATCTCCAAATGCCTGATATAGATGGATTCGAAGTCGCCGCAAGGATTCGGAAGTTTAAAAGCGGAAATAGGCCTATAATTGTTGCCTTGACTGCAAGTGCAGAAGAAGATTTGTGGGAAAAGTGTATGCAGATTGGTGTTAATGGAGTAATCCGAAAACCGGTTTTGATGCAAGGAATTGCTAGTGAACTCAGAAGAATTCTGATGCAGGGAAATCTTTGA 2280 0.4228 MVKAIVSVLLIASILLCVSATTDNEFPRCNCDDETSFWTIESILECQRVGDFLIAVAYFSIPLELLYFVSCSNVPFKWVLVQFIAFIVLCGLTHFLNGWTYGPHTFQLMVALTIFKILTALVSCATAITLVTLIPLLLKVKVREFMLKKKTWDLGREVGLIMKQKEAAMHVRMLTQEIRKSLDRHTILYTTLVELSKTLGLQNCAVWMPNEEKTVMNLTHELNARNLDISIPITDPDVVKIKGSNGVNILSSESALAVSSVGVSGDAGPVAAIRMPMLRVCNFKGGTPELTQACYAILVLILPAEEPRSWSNQELEIIKVVADQVAVALSHAAILEESQLMREKLEERNRALQLARRNAMMASQARNSFQKVMSDGMRRPMHSILGLLSMIQDDNLKNEQKLIVDAMLKTSNVLSNLINDAMDSSAKDDGRFPLEIRSFGLHSMIKEAACLAKCMCVYKGLGFMVEVDKSLPNHVMGDERRVFQVILHMVGNLLDCNHGEGGILVFRVSADAGSQGRNEKGWATWRPSSSSGDVNIRFEIGINGSDSEVGSSVSSGPGGRTYTSDRYEGRLSFSICKRIVQLMQGNLWLVPYTHGIPQSMTLLLRFQLRPSIAIAISEPGESSERNYSNSLLRGLQVLLVDNDDVNRAVTQKLLQKLGCSVTSASTGFECLTVIGPVGSSIQVILLDLQMPDIDGFEVAARIRKFKSGNRPIIVALTASAEEDLWEKCMQIGVNGVIRKPVLMQGIASELRRILMQGNL* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2582 759 CDD HATPase_ETR2_ERS2-EIN4-like 471 604 - -
Mtr1g2582 759 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 434 592 IPR036890 -
Mtr1g2582 759 Gene3D - 170 336 IPR029016 -
Mtr1g2582 759 SUPERFAMILY GAF domain-like 186 332 - -
Mtr1g2582 759 Pfam His Kinase A (phospho-acceptor) domain 366 429 IPR003661 GO:0000155|GO:0007165
Mtr1g2582 759 Pfam GAF domain 183 329 IPR003018 GO:0005515
Mtr1g2582 759 SUPERFAMILY CheY-like 633 754 IPR011006 -
Mtr1g2582 759 Gene3D - 431 607 IPR036890 -
Mtr1g2582 759 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 10 758 - -
Mtr1g2582 759 Gene3D - 635 758 - -
Mtr1g2582 759 CDD REC_ETR-like 635 750 - -
Mtr1g2582 759 Gene3D - 337 430 - -
Mtr1g2582 759 SMART gaf_1 183 339 IPR003018 GO:0005515
Mtr1g2582 759 SMART REC_2 635 754 IPR001789 GO:0000160
Mtr1g2582 759 PIRSF Ethylen_sen_hybr_HK 1 759 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Mtr1g2582 759 Pfam Response regulator receiver domain 637 746 IPR001789 GO:0000160
Mtr1g2582 759 PANTHER ETHYLENE RESPONSE SENSOR 2 10 758 - -
Mtr1g2582 759 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 350 431 IPR036097 GO:0000155|GO:0007165
Mtr1g2582 759 CDD HisKA 363 425 IPR003661 GO:0000155|GO:0007165
Mtr1g2582 759 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 477 593 IPR003594 -
Mtr1g2582 759 SMART HisKA_10 365 430 IPR003661 GO:0000155|GO:0007165
Mtr1g2582 759 Coils Coil 335 362 - -
Mtr1g2582 759 ProSiteProfiles Response regulatory domain profile. 636 754 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2582 Mtr-Chr1 36711314 36715490 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2582 23 754 Miscellaneous Gene Families AT3G04580 58.177 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mtr1g2582 GAF 4.8e-12 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2582 K14509 - gmx:100787425 1253.43