Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2551 ATGGATCCCTTTTCATTTTCATATTATTATTCAATTCACATGAAAGAACACATCATCACCAACTCAATGGATCCCAAAACCGGCTTCAATTCCATTTCCAAAACCTTCCACAGTCTCAGACCCCCACTCAACCTTCCTCCACCACACGCCAATATCTCCGCCGCAACATACACCTTCTCCCTCCACCACTCTGACTTCAACTCCGACTCAAACACTCTCCTCATCGACTCAACAACATCTCACAAACTCTCTTACTCCACCTTCATCCAACGCTACAAAACCCTCGCGAAAAACCTCACTCTCCGCGGACTCACCAAACACCACACCTCATTCATTCTTTCCCCAAACCTCGTTCAGGTTCCAATCCTCTACTTCGCATTGCTCTCCATTGGCGTCGTTGTTTCACCAACAAACCCAATCTCCACTCCCTCAGAAATTTCTCATCTCGTTAACCTCTCTAAACCGGTTATCGCTTTTACGACGTCGTTTTTATCTCACAAACTTCCGAAACAACTCGCTTTAGGAACGATTCTCATCGACTCGCCCGAGTTCGAATCCCTCACCACCGAAACAGATGTTAGTTCGACGGTGTCGCCGCCGGAGGTCAGTCAATCCGACGTGGCGGTGATTCTGTACTCGTCAGGAACCACAGGGAAATCGAAAGGAGTGATGCTTACTCATCGCAACTTGACGGCGACGGTGGCGGCATACAATGCCGTTAGGATTCCGACGGCGAATCCTGCGGTGTGTTTGTTAACAGTGCCGTGTTTTCACGTGTACGGTTTTACGTACCTTTTGAAGGGTGTGGCTATGATGGAAACGGTGGTGATGATGGAGAGGTTTGAATTGGGGAAAATGTTGGGTGCCGTGGAGAGGTTTAGAGTGACTAATGTTGCGGTGGCGCCGCCCGTGGTGGTGGCGATGAGTAAAGAGGGAGTGACGGATGGGTATGATTTGTCATCGTTAAAAACTGTGGCTTGTGGAGGTGCTCCGTTGGGAAAGGATAACTTTGTTGCTTTCATGGCAAAGTTCCCTCATGCATCTATTATCCAGGGATATGGTTTAACTGAATCAACAGCCGGTGTTATCCGAATAGTAGGTCCTGAGGAGGCTAGCCGGGGAGGAACTACAGGGAAGCTGGTATCAGGGATGGAAGCTAAAATAGTGAACCCAAACACAGGAGAGGCCATGTCTCCTGGTGAACAAGGGGAACTTTGGGTTAGAGGACCTCCAATTATGAAAGGTTATGTTGGTGATCCAGTGGCAACTTCTGTTACTTTAGTGGATGGATGGTTGAGAACCGGTGATATTTGCTATTTTGACAATGAAGGTTTCGTGTATGTTGTAGACAGGTTGAAAGAATTGATCAAATATAAAGGCTACCAGGTGGCTCCTGCAGAGCTGGAACAATTGCTCCAATCTCACCCAGAGATAAAAGATGCTGCAGTTATCCCATACCCTGATGAGGATGCTGGCCAGATTCCCCTAGCTTTTGTGATAAGGCAGCCTCACAGCTCCATGGGTGAAGCCGAAATAATAAATTTTGTAGCCAAACAGGTTGCACCATACAAGAAGGTATTATCTTTCATATTTCGTAAAATATAA 1605 0.4704 MDPFSFSYYYSIHMKEHIITNSMDPKTGFNSISKTFHSLRPPLNLPPPHANISAATYTFSLHHSDFNSDSNTLLIDSTTSHKLSYSTFIQRYKTLAKNLTLRGLTKHHTSFILSPNLVQVPILYFALLSIGVVVSPTNPISTPSEISHLVNLSKPVIAFTTSFLSHKLPKQLALGTILIDSPEFESLTTETDVSSTVSPPEVSQSDVAVILYSSGTTGKSKGVMLTHRNLTATVAAYNAVRIPTANPAVCLLTVPCFHVYGFTYLLKGVAMMETVVMMERFELGKMLGAVERFRVTNVAVAPPVVVAMSKEGVTDGYDLSSLKTVACGGAPLGKDNFVAFMAKFPHASIIQGYGLTESTAGVIRIVGPEEASRGGTTGKLVSGMEAKIVNPNTGEAMSPGEQGELWVRGPPIMKGYVGDPVATSVTLVDGWLRTGDICYFDNEGFVYVVDRLKELIKYKGYQVAPAELEQLLQSHPEIKDAAVIPYPDEDAGQIPLAFVIRQPHSSMGEAEIINFVAKQVAPYKKVLSFIFRKI* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2551 534 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 23 528 - -
Mtr1g2551 534 CDD 4CL 49 526 - -
Mtr1g2551 534 Pfam AMP-binding enzyme 72 458 IPR000873 -
Mtr1g2551 534 Gene3D - 454 533 IPR045851 -
Mtr1g2551 534 Pfam AMP-binding enzyme C-terminal domain 467 528 IPR025110 -
Mtr1g2551 534 Gene3D - 45 453 IPR042099 -
Mtr1g2551 534 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 23 528 - -
Mtr1g2551 534 SUPERFAMILY Acetyl-CoA synthetase-like 70 531 - -
Mtr1g2551 534 ProSitePatterns Putative AMP-binding domain signature. 210 221 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2551 Mtr-Chr1 36369663 36377338 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2551 23 531 Monolignol Biosynthesis Gene Families AT5G63380 50.191 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2551 - K01904 gmx:100801143 632.484