Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr1g2550 | ATGTATTCAGGAATGATGGAAGGAAACACTGGATGGAGTGTAATAGAAGAAGATAGATGGAGGAAAGGACCTTGGACTTCTGAGGAAGACAAATTGCTCATTGAGTATGTCAAGCTGCATGGTGAAGGCAGATGGAACTCTGTCTCTAGGCTTGCAGGACTGAGAAGAAATGGGAAAAGTTGTAGATTGAGATGGGTGAACTACCTAAGACCAGACCTCAAGAAGGGTCAGATAACACAACAAGAAGAAAGCATAATCCTAGAGCTACATGCTAGGTGGGGAAACAGGTGGTCAACAATTGCGAGAAGCTTGCCGGGAAGAACAGACAATGAGATAAAGAACTATTGGAGGACTCATTTCAAGAAAAAGAACAAAAACCCCACTGATGCTGCTGAAAAGGCGAAAAACCGTTATTTCAAGAGGCAGCAACAACAACAATTGAAGAAACAACAGCAACAAGTTCAGATGCAGCAACAACAACTGCAATACAACATGGACATGAAAGGGATCATAGACTTGTTGCTTGAGGAAAATGACTACTGTACTAGTGTACCTTCTACTTCTCAAGAGACACAAGAAATGGTTTCCATGTATGCAGATACGCAAGAACAACAGGGTTGCTTTTACTCTATGCTCAATGATAATAATGGTAATGTCTATGCACATGAGTCTTCAAATGAAGAAATTTTGTGGGATGGACTTTGGAACTTGGATGATGCTCTTGGAAATTCAATGCAGCTAATGCTACAAGCAAAGCCAGCCAATGTGTGTTAA | 774 | 0.4109 | MYSGMMEGNTGWSVIEEDRWRKGPWTSEEDKLLIEYVKLHGEGRWNSVSRLAGLRRNGKSCRLRWVNYLRPDLKKGQITQQEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKNKNPTDAAEKAKNRYFKRQQQQQLKKQQQQVQMQQQQLQYNMDMKGIIDLLLEENDYCTSVPSTSQETQEMVSMYADTQEQQGCFYSMLNDNNGNVYAHESSNEEILWDGLWNLDDALGNSMQLMLQAKPANVC* | 258 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr1g2550 | 257 | ProSiteProfiles | Myb-like domain profile. | 17 | 69 | IPR001005 | - | |
Mtr1g2550 | 257 | Pfam | Myb-like DNA-binding domain | 22 | 69 | IPR001005 | - | |
Mtr1g2550 | 257 | Pfam | Myb-like DNA-binding domain | 75 | 119 | IPR001005 | - | |
Mtr1g2550 | 257 | Coils | Coil | 257 | 257 | - | - | |
Mtr1g2550 | 257 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 21 | 73 | IPR017930 | - | |
Mtr1g2550 | 257 | Gene3D | - | 22 | 74 | - | - | |
Mtr1g2550 | 257 | CDD | SANT | 24 | 69 | IPR001005 | - | |
Mtr1g2550 | 257 | Gene3D | - | 79 | 123 | - | - | |
Mtr1g2550 | 257 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 74 | 124 | IPR017930 | - | |
Mtr1g2550 | 257 | PANTHER | MYB TRANSCRIPTION FACTOR-RELATED-RELATED | 1 | 251 | IPR044676 | GO:0003700|GO:0006355|GO:0043565 | |
Mtr1g2550 | 257 | PANTHER | MYB TRANSCRIPTION FACTOR | 1 | 251 | - | - | |
Mtr1g2550 | 257 | CDD | SANT | 79 | 120 | IPR001005 | - | |
Mtr1g2550 | 257 | Coils | Coil | 140 | 160 | - | - | |
Mtr1g2550 | 257 | SMART | sant | 74 | 122 | IPR001005 | - | |
Mtr1g2550 | 257 | SMART | sant | 21 | 71 | IPR001005 | - | |
Mtr1g2550 | 257 | ProSiteProfiles | Myb-like domain profile. | 70 | 120 | IPR001005 | - | |
Mtr1g2550 | 257 | SUPERFAMILY | Homeodomain-like | 19 | 116 | IPR009057 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr1g2550 | Mtr-Chr1 | 36356590 | 36357940 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr1g2550 | 17 | 238 | MYB Transcription Factor Family | AT3G24310 | 59.130 | 2.33e-80 | 241 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Mtr1g2550 | Myb_DNA-binding | 8.5e-17 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr1g2550 | K09422 | - | gmx:100782089 | 346.665 |