Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2523 ATGAGCATCTCATTGTCCATGTGCAGACTAATTAGACAACCCTTAACAAGCAATGTTCAATGCAGTGGCAAAAAACTGAATATGAGACAAATTCAAAAAGAAAATGTAGTGTTGGTGATGGGCGCAACAGGAACAGGAAAGTCAAAGCTTTCAATTGACTTAGCCAATTATTTCCCGTCAGAAATCATCAACTCAGACAAAATTCAAATCTACGAAGGTTTGGACATAGTAACAAACAAAATCACTCTAGAAGAACAAAAAGGAATACCACACCATTTATTAGGAACACATAACCCCAACATAGAGTTCACATCCAATGATTTTCGCGAAAAATCAACTTCAGCGATTGATTTAATCATGAGCGGTGGAAATCTTCCGATCATCGTTGGTGGCTCTAATTCCTACCTTGAAGCCTTAGTTGACGATGATGATTACAATTTTCGATCGAGGTACAATTTTTGTTGCCTTTGGGTCGATGTTTCCATGCCTATTCTTCGTTCCTACATAGACCAACGTGTTGATCAAATGTTAAACAGTGGAATGGTTAATGAGTTGCGACCCTTTTATAATCCGAACGGGGATTACTCAAAAGGGATAAGAAAAGCCATCGGTGTTCCTGAATTCGATGAGTATTTTCGTAGAGAAAGTTATGTTGACGATGAGACGAGGAAAATGTTACTTGATAAAGCAGTGAGTGAAATGAAGATAAATACATGGAAATTAGCTAAGAAACAACTGGGAAAAATTGATTGGCTTAAGAATGTTAAGAGATGGAACATTCATCGATTAGATGCTACACCTGTTTTTAAGAAGCATGGAAAAGAAGCTGATGAAACATGGAAGAAGATTGTTGCAGAGCCTAGTGCTATGATTGTGGCACAATTTTTATATAACTCAAGAAATCCTGCTAACGTTGTAAAATCTTCTTCCAATCTTAGAGTGCCAATTTCTCAGGGTGATCTAATGGCTACTGCAACATGTTGA 984 0.374 MSISLSMCRLIRQPLTSNVQCSGKKLNMRQIQKENVVLVMGATGTGKSKLSIDLANYFPSEIINSDKIQIYEGLDIVTNKITLEEQKGIPHHLLGTHNPNIEFTSNDFREKSTSAIDLIMSGGNLPIIVGGSNSYLEALVDDDDYNFRSRYNFCCLWVDVSMPILRSYIDQRVDQMLNSGMVNELRPFYNPNGDYSKGIRKAIGVPEFDEYFRRESYVDDETRKMLLDKAVSEMKINTWKLAKKQLGKIDWLKNVKRWNIHRLDATPVFKKHGKEADETWKKIVAEPSAMIVAQFLYNSRNPANVVKSSSNLRVPISQGDLMATATC* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2523 327 Gene3D - 33 296 IPR027417 -
Mtr1g2523 327 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 26 301 IPR039657 -
Mtr1g2523 327 Pfam IPP transferase 69 142 - -
Mtr1g2523 327 Pfam IPP transferase 148 246 - -
Mtr1g2523 327 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 162 260 - -
Mtr1g2523 327 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 189 IPR027417 -
Mtr1g2523 327 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 26 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2523 Mtr-Chr1 36099816 36101324 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2523 149 296 C2H2 Transcription Factor Family AT2G27760 27.429 4.79e-22 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2523 K10760 - gmx:100803964 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2523 1 36099816 36101324 Mtr1g2523 1 36099816 36101324 ECH