Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2501 ATGCCAAACACAAGAAATCTGAGGAACCTCAACCTATGTTTTTCAAATTCAACTCTTGAATCAAAATCTCCACCCACAAGTCCAATTTCTACAACTATCAGTGAAGCTTCCTCACATCAACATCATCATCAAATTCTTCAAAAGCCTTCTTCATCTACACCTTCCCCATCAATTATGATCAAGAATTTCAACTCTCTCTATGACCCTTCCTTAACCTCTGACCACACTTTATGCTCTTCTTCACTCTCTACCACCTTCACTACATCAACCTCTTTCGATCTCGAAATTGAACCCGAACCTGAGCCAGCAGATTTTGCAGCAGCCTTCGCCTCTCAACGCTTCTTCTTCTCCTCCCCCGGTAGCTCTAACTCATTAATTGAATATACAAACACAGATTGCATTCAACATTCTTCGGTACCACTGATGGATAAGTCCAATAGTACTAAGCGTGAGAAGAAACAAGAGAAAGAGAAAGAGGAGGTTTTGTTCAATGGAAGTGTGGCAGTACCAACCTACTCGCCCGATCCTTATATGGATTTTAGAAGATCGATGCAAGAGATGGTGGAGGCGCGACCGGAGTTGATGGATGTGAAATCAAATTGGAACATCTTGCATGAGTTGCTTCTTTGTTACCTTGCTCTCAACCCAAAGAATACTCACAAGTTCATTCTTGGTGCTTTTGCCGATCTCCTCGTTACCCTCATGTCATTCTAG 714 0.4216 MPNTRNLRNLNLCFSNSTLESKSPPTSPISTTISEASSHQHHHQILQKPSSSTPSPSIMIKNFNSLYDPSLTSDHTLCSSSLSTTFTTSTSFDLEIEPEPEPADFAAAFASQRFFFSSPGSSNSLIEYTNTDCIQHSSVPLMDKSNSTKREKKQEKEKEEVLFNGSVAVPTYSPDPYMDFRRSMQEMVEARPELMDVKSNWNILHELLLCYLALNPKNTHKFILGAFADLLVTLMSF* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2501 237 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 7 236 IPR038933 GO:0045892
Mtr1g2501 237 PANTHER TRANSCRIPTION REPRESSOR OFP12 7 236 - -
Mtr1g2501 237 MobiDBLite consensus disorder prediction 16 54 - -
Mtr1g2501 237 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 167 235 IPR006458 -
Mtr1g2501 237 Pfam Transcriptional repressor, ovate 173 234 IPR006458 -
Mtr1g2501 237 ProSiteProfiles OVATE domain profile. 169 233 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2501 Mtr-Chr1 35890921 35892039 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Mtr1g2501 Ovate 2.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2501 - - aprc:113871147 243.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2820 7 44897316 44897945 Mtr1g2501 1 35890921 35892039 PCT