Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2488 ATGGGAAACGTAGACTATGATGATTACCCTTGTTCAGGCATGAACGTTGATGAGAGTGTGCATGGTGTGGCAATTCCACCTCCTCAACCATTTTTGAAGTCTATGAAGTATTCAATGAAAGAGACTTTCTTTCCAGATGATCCATTGAGGAGGTTTAAGAATCAACCAGCTTCTAAAAAATTGGTGCTTGGTCTTCAGTATTTTTTTCCCATATTTGAATGGGCACCAAGCTACACTTTTCAGTTCTTGAAATCTGATCTCATAGCTGGCATCACTATTGCTAGCTTGGCTATTCCTCAAGGCATTAGTTATGCCAAACTTGCCAACCTCCCTCCAATTCTTGGACTATATTCAAGCTTTATACCACCGTTAATTTATGCAATGATGGGTAGTTCAAGGGATTTGGCAGTTGGAACTGTGGCAGTTGGATCTCTTCTGATGGGTTCCATGTTGGCCAATGAGGTTAATCCTACCCAAAATCCAAAGCTTTTTCTGCACCTTGCTTTCACAGCTACATTCTTTGCTGGACTTTTGCAAGCTTCATTGGGTCTCTTTAGGTTAGGGTTTATCGTGGATTTCCTGTCACATGCAGCCATAGTAGGGTTCATGGGAGGAGCAGCCACGGTGGTTTGTCTACAGCAGCTGAAATCAATTCTAGGACTTGAACATTTCACCCATGCTGCTGATATTGTATCCGTCATGCGCTCCGTTTTTACCCAAACTCATCAGTGGAGGTGGGAAAGCGCTGTGTTGGGATTTTGCTTCATTTTCTTTCTCCTTGTTACAAGATACTTCAGCAAAAAACAACCCAAGTTCTTTTGGGTGTCAGCAATGACGCCGTTAGCGTCCGTTATACTGGGCAGTTTGCTGGTTTATTTCACTCATGCCGAGCACCACGGCGTTCAAGTGATAGGAGAATTGAAGAAAGGACTAAATCCACCATCACTCACAGATTTGGTATTTGTGTCACCATATATGACCACAGCTATCAAAACAGGCCTTATTGTTGGCATTATAGCTCTTGCGGAAGGAATCGCTGTGGGAAGAAGCTTTGCAATGTATAAAAATTACCATATTGATGGAAACAAAGAGATGATAGCTATTGGAACCATGAACATAGTTGGTTCTTTCACCTCTTGCTACCTCACAACAGGGCCATTTTCGCGCTCGGCCGTGAACTATAATGCTGGATGCAAGACAGCAGCATCCAACATTGTGATGTCAATTGCAGTCATGTTGACACTGTTATTCTTGACACCTTTGTTCTATTACACTCCTCTGGTGGTACTAGCAGCCATAATTGTATCTGCAATGCTTGGACTTATAGATTATGAAGCAGCCATCCATCTCTGGAAGATTGACAAATTCGATTTTTTCGTCTGCATTAGCGCGTATATGGGCGTTGTCTTTGGCAGTGTTGAAATTGGCTTAGTCATAGCAGTTGCTATATCAGTACTTCGGATATTGCTATTTGTTGCAAGGCCAAGGACATTTGTTTTGGGAAACATTCCAAATTCTGTAATATACAGAAACATTGAGCATTATCCGAATGCAAATCGTATTTCCGGAATTCTAATTCTAAAGATTGATGCACCAATTTACTTTGCCAATGCAAGCTATTTAAGAGAAAGGATCTCAAGGTGGATCGATGAAGAGGAAGATAGAATTAAAGATACAGGGGAGACAATTTTGAATTATGTTATACTGGATATGAGTGCTGTTGGAAATATTGATACAAGTGGAATAAGTATGCTTGAAGAGGCTAAGAAGATGGTTGAAAGAAGAGAGCAGCAACTTGTTTTAGTCAATCCTGGAAGTGAGGTGATGAAGAAGTTAAACAAATCCAGCTTCCAAAAGGATGTAGAAGGAAATTGGATTTATCTGACAGTGGAAGATGCTGTTAGAGCATGTAACTTTGCATGCAAAACAAATCCCAAAAGAGATGAATCAGAGGGTTGGAACAATGTCTGA 1971 0.4094 MGNVDYDDYPCSGMNVDESVHGVAIPPPQPFLKSMKYSMKETFFPDDPLRRFKNQPASKKLVLGLQYFFPIFEWAPSYTFQFLKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMGSMLANEVNPTQNPKLFLHLAFTATFFAGLLQASLGLFRLGFIVDFLSHAAIVGFMGGAATVVCLQQLKSILGLEHFTHAADIVSVMRSVFTQTHQWRWESAVLGFCFIFFLLVTRYFSKKQPKFFWVSAMTPLASVILGSLLVYFTHAEHHGVQVIGELKKGLNPPSLTDLVFVSPYMTTAIKTGLIVGIIALAEGIAVGRSFAMYKNYHIDGNKEMIAIGTMNIVGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIVMSIAVMLTLLFLTPLFYYTPLVVLAAIIVSAMLGLIDYEAAIHLWKIDKFDFFVCISAYMGVVFGSVEIGLVIAVAISVLRILLFVARPRTFVLGNIPNSVIYRNIEHYPNANRISGILILKIDAPIYFANASYLRERISRWIDEEEDRIKDTGETILNYVILDMSAVGNIDTSGISMLEEAKKMVERREQQLVLVNPGSEVMKKLNKSSFQKDVEGNWIYLTVEDAVRACNFACKTNPKRDESEGWNNV* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2488 656 Pfam Sulfate permease family 83 463 IPR011547 GO:0016021
Mtr1g2488 656 TIGRFAM sulP: sulfate permease 70 633 IPR001902 GO:0015301|GO:0016020|GO:0055085
Mtr1g2488 656 PANTHER SULFATE TRANSPORTER 2 654 IPR001902 GO:0015301|GO:0016020|GO:0055085
Mtr1g2488 656 Pfam STAS domain 515 633 IPR002645 -
Mtr1g2488 656 CDD STAS_SulP_like_sulfate_transporter 515 630 - -
Mtr1g2488 656 Gene3D STAS domain 494 640 IPR036513 -
Mtr1g2488 656 ProSiteProfiles STAS domain profile. 514 637 IPR002645 -
Mtr1g2488 656 ProSitePatterns SLC26A transporters signature. 112 133 IPR018045 GO:0008271|GO:0008272
Mtr1g2488 656 PANTHER SLC26A/SULP TRANSPORTER-RELATED 2 654 - -
Mtr1g2488 656 SUPERFAMILY SpoIIaa-like 517 637 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2488 Mtr-Chr1 35661842 35669103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2488 21 656 Inorganic Solute Cotransporters AT4G02700 69.231 0.0 917
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2488 K17471 - gmx:100810196 1099.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2488 1 35661842 35669103 Mtr1g2488 1 35661842 35669103 ECH
Mtr7g2834 7 45070145 45077757 Mtr1g2488 1 35661842 35669103 PCT