Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2481 ATGATTAGAAAGCACTTATTCATCGCGTTAGGGTTTCTTCTCCTCTCCACAACAATCCCCTTCTCTCACGCTGAATCATCCACATGCTTAACCGTTTACAAACACGGTGGCGCTCCGGCGGTGTTCCAATCCCCAAAATGCCCTCGCTGGAACCTCTTCGATCACAATTCTCGTCCTCAATACACCACACGTTGCCACTCTGCAATGCTCCAAGGTCGAAGAAAATCTCAAGAGGATCGCACTCTCTGCGTCCTCGATCTTCGCATTCCATTTCCCGGTGCAATGGGAATTAAAGAGGTCGTGGTTGGGATTGTGGCGGTTTTTGACGGTCATAATGGTGCAGAAGCTAGTGAGATGGCGTCGAATTTATTGATGGAGTATTTTGTTCTTCATACTTATTTTCTTCTTGATGCTATGTATTCTGTTATATCCAAGGCTTCGACTGGAACGTTGCTTCACGGGAGAGATCATGATCATGTAAACATACTGCATAGATGGAAAGAGATTTTAGGTTGGCAATTGAATGAATTTCATTCTGAAAGGTTGCAGAGTACATTTTCTGCTAACTTTGATGATTCTTTTCACTTGGAAATTTTGAAAGAAGCATTGTTAAGAGCAATCCATGATATTGATGAAAAGTTTTCTGAGGAAGCCTCTAGGAATAACCTTCATTCAGGATCTACAGCAACAGTTGTATTGGTTGCAGATGATAAAATTTTGGTTGCCAATATTGGAGACTCCAAGGCTTTCTTGTGCTCTGAAAATTTTCAGTCTCCTAAGGAGGCTAAAGCCTCTTTATTAAAGCTATACAGGCAGACAGAGCGTGATGGTTCTGTTTCTGTGTGGGATCGCAAAAAGTACAAATTAGCTTCTTCCCAAGGGCTCACTCATTTTGCAGTAAAGGAATTGACTAGTGATCATCATCCAGACAGAGAGGATGAAAGAACTCGGGTGGAAGCTGCTGGTGGTCAAGTTCTAAATTGGGGCGGTTTGCCTCGCGTAAATGGTCAGTTGGCTATAACACGGGCTATTGGTGATGTGTTCTTTAAAAGTTATGGAGTTGTATCTGCACCAGAAGTGACTGATTGGCAGCCTCTAACTGCTAACGATAGCTACTTGGTGGCTGCATCTGATGGAGTCTTTGAGAAGTTGAGTGTGCAAGATGTCTGTGATTTGTTGTGGGAAGTACACCATTTATGTGACATGAGATCAGATTGCACCTCTTCAGCTTCTTATTCATTAGCAGATTTTATTATTAATACTGCCTTAAAAAAGGGCAGTATGGACAATATGGCAGCAGTTGTTGTTCCTCTGGAATCTTTCAAATCTTCTGCTAACTCGCTTAGAAGAAGCTACACTGAAAACGAGGATGCAGGTTTCCCATTATTTGGCCTGCAGGAATCTGCTTACAGAAGCTCAGCCAATGGTATCACCTCTGATCGATTGCACCTGGAGCACCCTAATCTGCCAGATACCAAGTTTAAGCGAATAATGGTTGAAGTGAAACATGGTGATTTTGGATGTTTTTATTTATCAGAAAATCTTGGTGATTTGGTGGATTCTAAGTGGCTTGCCAAAAAAGATGACTGGGAAGACTATTTGTATGAACTACCCCAGCCTCTGCCAGATGCCCTTCATCAACAAGCTGCAGTAGATGGCCCTGTAATTTTGTACAACGACCAAAACTTCTGTTTTCACCTGAGTTCAACTATCAATGAAGCCAATGACCAATGCATAAATCCTGAAGGCTTTGCCAGTTTTATTGGTCTTCTTGAATCAATTCCTTTACATGATACTGGTTCAGATAACAGGTCTTCTGATTATTCGATGCCTGATTCAAGGTATGTATTAAGGAGGAGTTTTGGTCGTGGATCATATGGCGAAGTATGGTTGGCTTTTCATTGGAATTGTAACCAAGGTAATATTACTGCAAAAATGAGCAAGAGTGACAATAATAGAGACAGCAGCTCAAGTAATCCTGAGTGTCAGGATGGTCCTTCTAACTACACCCTGTACATTTTGAAACGTATAATGGTAGAGAAAGGGTCTGCTGTGTACTTAAGTGGGCTGAGGGAAAAACATTTTGGAGAAATTTTCTTAAATGCCTCCATGTGCTTTGAAGATGTGCTGTTGGCTGGAAAATCTAACTGTGTATACGAAACATCACAATATGATTCTGAGTATTCATTTCAAAACAAATTTCGACTGCAAGGAGCCATATATGAAGAAGGTTTGGACCACATTGCAAGATATGTGGAATCTTTTGAGTCTCGGTCCAATGAAATATGGCTTGTATTCAGTTATGAAGGAGTGTCGTTGTCAAAACTTTTATATACTGTAGAAGATGCAAACAATACTGCCGAGAAAGAAAGACTTGAGCAAGTGAAACAGGTTCGGATACTACGTCCATCAAAGTGGTGGCGTTGGTTGAAAACAACGGAAGAAGGGCAAGAGGAAATGCGCAACCTTATCTGGCAACTGTTATTGGCACTCAAGTCTTGTCACGACCGCAATATCACACACAGGGACATTAAACCTGAGAATATGGTGATATGCTTTGAAGATCCGGAGTCAGGGAGATGCTTGAAAGATGCTCCAACAAAATTGAATAATTTTTCCACCAAAATGCGTATTATTGACTTTGGAAGTGGAATTGACGAGTTCACAATAAAGCATTTATATGCTTCTACTGGGCCTTCTAGAGCTGAACAAACTTACGAGTACACTCCTCCTGAAGCTTTGCTAAATGCTACATGGTATCAAGGGCCAACAAGCTCAACTTTGAAGTATGACATGTGGAGTGTTGGTGTTGTGATGTTAGAGATGGTCTTAGGGACACCAAATATTTTCCAGATAAATGCTTTAACACGTGCTCTTTTGGATCGGCATCTTGAGGGCTGGAATGAGGGTGTGAAGGAGCTGGCATACAAACTTAGATCGTTCATGGAATTGTGCATCTTAATCCCTGGGGTTTCTGGCAGCTACTCAAAAAAGTATCACAAAGTGAATCAAGTTGGAGTTTCGCCTGCATCCTGGAAATGCTCTGAAGAATTCTTTTCTAGACAAATTAAGGCTAGAGATCCTCTTAAAATAGGTTTTTCAAACATCTGGGCTTTACGGTTAGTGCGCCATCTGCTTATGTGGGACCCGGAGGATCGGCCAAGTGTTGATGAGGCACTGCGGCATCCCTATTTCCATCCTCCACCAAGAAGATAA 3216 0.417 MIRKHLFIALGFLLLSTTIPFSHAESSTCLTVYKHGGAPAVFQSPKCPRWNLFDHNSRPQYTTRCHSAMLQGRRKSQEDRTLCVLDLRIPFPGAMGIKEVVVGIVAVFDGHNGAEASEMASNLLMEYFVLHTYFLLDAMYSVISKASTGTLLHGRDHDHVNILHRWKEILGWQLNEFHSERLQSTFSANFDDSFHLEILKEALLRAIHDIDEKFSEEASRNNLHSGSTATVVLVADDKILVANIGDSKAFLCSENFQSPKEAKASLLKLYRQTERDGSVSVWDRKKYKLASSQGLTHFAVKELTSDHHPDREDERTRVEAAGGQVLNWGGLPRVNGQLAITRAIGDVFFKSYGVVSAPEVTDWQPLTANDSYLVAASDGVFEKLSVQDVCDLLWEVHHLCDMRSDCTSSASYSLADFIINTALKKGSMDNMAAVVVPLESFKSSANSLRRSYTENEDAGFPLFGLQESAYRSSANGITSDRLHLEHPNLPDTKFKRIMVEVKHGDFGCFYLSENLGDLVDSKWLAKKDDWEDYLYELPQPLPDALHQQAAVDGPVILYNDQNFCFHLSSTINEANDQCINPEGFASFIGLLESIPLHDTGSDNRSSDYSMPDSRYVLRRSFGRGSYGEVWLAFHWNCNQGNITAKMSKSDNNRDSSSSNPECQDGPSNYTLYILKRIMVEKGSAVYLSGLREKHFGEIFLNASMCFEDVLLAGKSNCVYETSQYDSEYSFQNKFRLQGAIYEEGLDHIARYVESFESRSNEIWLVFSYEGVSLSKLLYTVEDANNTAEKERLEQVKQVRILRPSKWWRWLKTTEEGQEEMRNLIWQLLLALKSCHDRNITHRDIKPENMVICFEDPESGRCLKDAPTKLNNFSTKMRIIDFGSGIDEFTIKHLYASTGPSRAEQTYEYTPPEALLNATWYQGPTSSTLKYDMWSVGVVMLEMVLGTPNIFQINALTRALLDRHLEGWNEGVKELAYKLRSFMELCILIPGVSGSYSKKYHKVNQVGVSPASWKCSEEFFSRQIKARDPLKIGFSNIWALRLVRHLLMWDPEDRPSVDEALRHPYFHPPPRR* 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2481 1071 SUPERFAMILY Protein kinase-like (PK-like) 610 1067 IPR011009 -
Mtr1g2481 1071 ProSiteProfiles Protein kinase domain profile. 615 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2481 1071 Pfam Protein kinase domain 815 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2481 1071 Gene3D - 59 445 IPR036457 -
Mtr1g2481 1071 PANTHER PROTEIN PHOSPHATASE 2C 50-RELATED 17 602 - -
Mtr1g2481 1071 SMART PP2C_4 56 436 IPR001932 -
Mtr1g2481 1071 Pfam Protein phosphatase 2C 155 431 IPR001932 -
Mtr1g2481 1071 ProSiteProfiles PPM-type phosphatase domain profile. 64 438 IPR001932 -
Mtr1g2481 1071 CDD PP2Cc 71 438 IPR001932 -
Mtr1g2481 1071 PANTHER ALPHABET, ISOFORM E-RELATED 17 602 - -
Mtr1g2481 1071 Gene3D Transferase(Phosphotransferase) domain 1 805 1066 - -
Mtr1g2481 1071 ProSitePatterns Serine/Threonine protein kinases active-site signature. 839 851 IPR008271 GO:0004672|GO:0006468
Mtr1g2481 1071 SUPERFAMILY PP2C-like 59 440 IPR036457 -
Mtr1g2481 1071 SMART serkin_6 615 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2481 Mtr-Chr1 35584041 35599096 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2481 679 1069 PP2C-type Phosphatase Gene Family AT3G63340 65.985 2.26e-179 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSKL Mtr1g2481 Pkinase 8.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2481 - - gmx:100781476 1784.62