Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2471 ATGACCAGTAAAGTAAAATTAAACAACAAAGAAGAAATGATAGACATTGATCACAACTTAGATAAACATATTCACAAACAGATGGGATGCATGGCTGGTTTGTTTCAAATCTTCGACCGTAACCATTTTCTTTCTGGCAAACGCATCTACAACAACACTAAAAGATTACCTCCGCCTTCACCGGAGAAATCAGAGAAAGATGATGGCAAACCGGTGTTTTCATCACCGTCACCGGTTAAAGAGATCAAAAGTGAAACAAAACAAGTCCTTCCTGTTCTGGAACTTAAGGAAGGTACAAGGTCTTCATGGAAATTCTCAAGAGAGGCTCCTAGGCTTTCTTTAGATAGCAGAGCAGTTGTTGATGCCAAAGGAGGGCTTCACCCTAGAGAGATCCGAACAAATGCAACTGCTAATCTTGAGAACGACGGTGATAAACAGCGTCGTTCTACTAGTAGTGTTATTGTTAGATTAATGGGTCTTGACTCATTACCATCGGATTCCGGCGCAAAGCTTCAGAGATCTGCGTCCGAGTCCAGAGTCTCCAGAGATCGGTTTTCAGAGCCAAAATTGAAGTCCAACGGTTACACTCAACGGAGCAATGTCGGCTCGGGCCAGATGAATAATAATAATCATCATCGTTCTAATGCTGTTAATGTTAATAATAATGTTAATGTTGTTAATTCTTATGGTAACATTGATAATGGATTGTGGAATGGTAGAGGTGTGGAAGGAGGAAGAGGGAAGCAGAATAAGGGAACAATGATGGTGCAAAAGAAGAGTTTCTACGACTCTACTGATTTCTTCCCTGAACCAAAGCACAATGATTTGATCTATGGAGAGATTGAGAAAAGGTTGAAGATGCGTGGGATTAACCAACCTTCTCAAGATCTTGACACACTCAAGCATATCTTAGAGGCTCTGCAGCTTAAAGGTCTGCTTCATTCACAAAAACATGACCAATCTCCCATTGTGCTAATGAAACCACTGAGATCTTCTTCTCTTTCTCGGTTTGAGCGGTTTAATAGAACCGGTTATGATTCTCCTCCTCCGCATTCTTCTGTTCGGTCCAGTCCTCGTGCTCGTCGAAACTTGAGCCCAAGATTTGATGACCGGGCTCAAGTTAATTCGAGAAACTCAAGTCCGACCCGGAGGAATGTCCCGAACGTGGAAACACGGAGGAGGCTTAGTAATGAAGGTGTTGATTCTAGAAGAGTGTCCCCGGTTAATTCGCCGAAGATAAGTTCAAGAAGAAATGCAACTGCTCAGACAGCGACAGGAGGATCTCCCAGGATGAGAAAAGTGATTGATCCTAAGGTGAAAATGTTGGGTGTAGCAGAGGATGAATGGTCCACAGTTTCAGAGAATAGCTTCACCACCTCCAATTCACTTACCGACACAGAGAAGTATAAATTGGAGGAGTACAAAGAAGGGAGGAATCTGCTTGATAGATGTGATAAATTGTTGAACAGCATAGCTGAGATAACAGCCGCGAACGAGTTACAACCGAGTCCAGTATCGGTTCTTGACTCGTCTTTTTACAAGGACGAGTGGTGCTCACCTTCACCAATTACCAAACGATGCATTGATTACAATTTCAAAGATCAATCTACGGAATCAGAAGATGATATGTGGAGTGCAGGAGAAGGAAAATCCGAGGAGGAGGCAAAATCGGAGGATTGTGATTTTGTTTATGTGTCGGAGATTCTGCGAGCTTCTAGTTACTTGCCTGAAGAATGCGACATTTTCCTCCTACTTGAGAAGCAACAATTTCGTAAGGGGAAGGATACTTCAAAAGCTCCGACTCTGCAGAGGCGGTTAATTTTCGACACGCTGCAGGAAATTCTTAACCGGAATCAAAGGTTACCACCGTGGAAGGCAGTGTCTAAAGGAGAGGAGACACATCATATTTGGTCAGAGTTTCGGAGGATAAGAGAGAGGGAGGAATCTGAATCAGAAGATTTGTTTGGAGTGATATGTGGTGTGTTGAAGAAGGATATGGCAGAGGAGATGAGTGGTTGGGGCGAATGGACGGTGGAGATGGGAGATGTCGTTTTGGACATCGAACGACTCGTATTCAAGGATTTAATTGGCGAAACTATACAAGATCTTGCTTCATTTGCACCTCAATGTAACAAACAAGAGGCGCTTCGAAGAAAGCTTGTGTTTTGA 2169 0.4306 MTSKVKLNNKEEMIDIDHNLDKHIHKQMGCMAGLFQIFDRNHFLSGKRIYNNTKRLPPPSPEKSEKDDGKPVFSSPSPVKEIKSETKQVLPVLELKEGTRSSWKFSREAPRLSLDSRAVVDAKGGLHPREIRTNATANLENDGDKQRRSTSSVIVRLMGLDSLPSDSGAKLQRSASESRVSRDRFSEPKLKSNGYTQRSNVGSGQMNNNNHHRSNAVNVNNNVNVVNSYGNIDNGLWNGRGVEGGRGKQNKGTMMVQKKSFYDSTDFFPEPKHNDLIYGEIEKRLKMRGINQPSQDLDTLKHILEALQLKGLLHSQKHDQSPIVLMKPLRSSSLSRFERFNRTGYDSPPPHSSVRSSPRARRNLSPRFDDRAQVNSRNSSPTRRNVPNVETRRRLSNEGVDSRRVSPVNSPKISSRRNATAQTATGGSPRMRKVIDPKVKMLGVAEDEWSTVSENSFTTSNSLTDTEKYKLEEYKEGRNLLDRCDKLLNSIAEITAANELQPSPVSVLDSSFYKDEWCSPSPITKRCIDYNFKDQSTESEDDMWSAGEGKSEEEAKSEDCDFVYVSEILRASSYLPEECDIFLLLEKQQFRKGKDTSKAPTLQRRLIFDTLQEILNRNQRLPPWKAVSKGEETHHIWSEFRRIREREESESEDLFGVICGVLKKDMAEEMSGWGEWTVEMGDVVLDIERLVFKDLIGETIQDLASFAPQCNKQEALRRKLVF* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2471 722 MobiDBLite consensus disorder prediction 340 360 - -
Mtr1g2471 722 MobiDBLite consensus disorder prediction 162 216 - -
Mtr1g2471 722 MobiDBLite consensus disorder prediction 125 150 - -
Mtr1g2471 722 MobiDBLite consensus disorder prediction 190 216 - -
Mtr1g2471 722 MobiDBLite consensus disorder prediction 49 81 - -
Mtr1g2471 722 PANTHER OS11G0587300 PROTEIN 15 722 - -
Mtr1g2471 722 MobiDBLite consensus disorder prediction 340 431 - -
Mtr1g2471 722 Pfam Domain of unknown function (DUF4378) 561 698 IPR025486 -
Mtr1g2471 722 MobiDBLite consensus disorder prediction 369 386 - -
Mtr1g2471 722 MobiDBLite consensus disorder prediction 402 427 - -
Mtr1g2471 722 PANTHER LONGIFOLIA PROTEIN 15 722 IPR033334 GO:0051513
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2471 Mtr-Chr1 35401808 35405021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2471 103 722 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 37.440 8.01e-99 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2471 - - mtr:MTR_1g071070 1370.53