Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2445 ATGGGCATGCCCGAAAACATAATTGTCGGTTCTCACGTTTGGGTTGCCGATCCAGAATTAGTTTGGATTGATGGAGTAGTACTGAATATTAATGGAGAAGAAGCTGAAATTCAAACTAGCAATGAGAAGATGGTAGTTTCCCGTCTGTCAAAATTACATCCCAAGGATACAGATGCTCCTACCGATGGTGTTGATGACATGACCAAGCTTGATTATTTGCATGAGCCAGGAGTGTTGTATAATTTGAAAAGTCGATATAAGATCAATGAAATATATACTTATACTGGAAATATTCTTATTGCGATCAATCCCTTTCAAAGTCTTCCACACCTGTATGATGCTAATGCAATGAAAAGATACAAGGGAGAGAGAATCGGAAATTTAAGCCCACATGTTTTTGCTATTGCTGAAGCAGCATATAGGGCTATGATTACTGAGGAGAAGAGCAACTCTATTCTTGTTAGTGGTGAGAGTGGCGCTGGTAAGACAGAAACCACCAAAATGCTTATGCTTTACTTGGCATATTTGGGTGGCAACACTGCATCTGAAGGACGGACTGTTCAACAGAAAGTTCTAGAATCAAACCCAGTTCTTGAAGCATTTGGTAATGCAAAAACAGTTAGAAATGACAATTCCAGCCGTTTTGGAAAATTTGTTGAGATTCAATTTGATAAGTATGGACGAATATCCGGTGCAGCTATTAGAACTTATCTGCTCGAGAAATCTCGTGTTTGCCAAATCTCAGATCCAGAGCGTAATTATCACTGTTTCTACCTTCTCTGCGCTTCTCCTGAGGAAAAGGAGAAATATAAGTTGGGGGACCCAAGATCATTTCATTACCTTAATCAATCCAGTTGCTATGAATTAGCTGGTGTTAATGCTGCTCAAGAGTACCTTAGCACCAAAAGAGCCATGGATATTGTGGGAATCAGTCAGGAGGAGCAGGATGCAATTTTCAGAGTTATTGCTGCTATTCTCCATCTTGGAAACATTAGATTTGAGAAATCAGAAGAAACAGATTCATCAGTTCTAGCAGATAAAGATTCCAAGTTCCATCTCGAAACAACTGCAGAACTTCTAATGTGTGATCCTAATGCTGTGGAAGTTGCACTATGTAAACGTGTGATGATCACCCCCGAAGAAATCATCGAAAGAAGTCTTGATCCTGTTGCCGCAACAGTTAGCAGGGATGGTTTGGCGAAGACATTATATTCTCGTTTGTTTGACTGGTTAGTCCAGAAAATTAATATCTCCATTGGGCAGGATAGTAACTCAAAATGGCTCATTGGTGTTCTTGACATATATGGCTTTGAAAGCTTTCAAACTAATAGTTTTGAGCAGTTTTGTATTAATTTTACGAATGAAAAGCTGCAGCAGCACTTCAACCAGCACGTTTTTAACATGGAGCAAGAGGAATACACAAAAGAAGGGATTGATTGGAGCTACTTAGAATTTGTAGATAATCAAGATGTGCTAGATCTCATTGAAAAGAAACCAGGTGGAATAATTGCTCTGCTTGATGAGGCTTGCATGTTTCCCAAATCAACTCATGAAACATTTTCAACAAAGCTTTATCAGACATTCAAAGATCACAAACGCTTCATCAAGCCAAAATTGGCACGCTCAGACTTCAATGTTGTTCATTATGCAGGGGTGGTCCAGTATCAATCTGAGCTTTTCATAGATAAAAACAAAGACTATGTTGTCCCTGAACATCAAGTCATGCTAAGTACTTCCAAATGTTCATTTGTATCAGGCCTTTTTCCTCCACTTTCTGAGGAGACAGCAAAATCTGCTAAGTTTTCTTCTATTGGCTCTCGTTTTAAGCTACAACTAAAACATTTGATGGAAGCGCTCAATCTGACAGAGCCCCACTATATTAGATGTGTGAAGCCAAATAATCTATTAAAACCTGGGATATTTGAGAACATGAACGTCATGCAGCAATTACGTTCTGGTGGTGTTCTTGAAGCAGTGAGAATAAAATGTGCTGGATTCCCCACTCACAGGACCTTTCATGAATTTTTAACTCAAGTAGGCATTCTTGCTCCAGAGATTCTTCGAGGGAACTTCGAAGAAAAGGAATCGTGCAAAATGATTTTAGAGAAGATTGGGCTGACAGGTTATCAGATGGGGCAAACGAAAATATTCCTAAGAGCTGGTCATATGGCAGAATTGGATGCTCTGAGAGCATACATGCTTAGCAACTCTGCAACAATTATCCAAAAGCATACTAGAACTCATTTTAGTCGGAAAACATATACTACACTGCGGAAGTCCTCTATCTTTGTGCAGTCTATTTGCAGAGGAGAATTGGCACGGAGACAATATTATCACATGAAGAGGAAAGCAGCTACCATCAAAATTCAAGCCTATACACGTGGAAGATTAGCCAGAAAATGCTACTCTGAAATAAAGATTTCTGTCGTTGTCTTACAGTCAGTTTTTCAGGCTATGGCTGCTCGACGTGCTCGTGATAAATTCAGACATATAAGGCAAACTAGGTCATCAACTATTATTCAGTCCTATTGGCGGCGACATAAAGCTCCCGTTGACTATCAGAACCTTAAGAAAGCATCAATCATTTCACAGAGTGTCAATCACTCTATCAATGAACATGAGAAGAAGGTTGTGGAGATATCAGTTGAAAATGAAAGTACTGCCATGGAAGAATCTTCAAATTCACTCCACAAGGAATCCTCAAGTTCTTTCCAAGATAATGAAAGCATTCAAGCTATTAAAGATTTCTCTAGTCCCCTCAGAGACACTGAAAGCAATGAAGCTATTAGGGATTTCTCTAGTCCCCTTAGAGACACTGAAAAGATTGAAGCTCTCTCTAGTCCCATCATAGTAGCATTATCCTTAGCATTGTATAGTTCTTTTTTGTTTTACCTTTTGTTAGTTTTGTCATATACTTGTTTATATTGTAAATAA 2934 0.3892 MGMPENIIVGSHVWVADPELVWIDGVVLNINGEEAEIQTSNEKMVVSRLSKLHPKDTDAPTDGVDDMTKLDYLHEPGVLYNLKSRYKINEIYTYTGNILIAINPFQSLPHLYDANAMKRYKGERIGNLSPHVFAIAEAAYRAMITEEKSNSILVSGESGAGKTETTKMLMLYLAYLGGNTASEGRTVQQKVLESNPVLEAFGNAKTVRNDNSSRFGKFVEIQFDKYGRISGAAIRTYLLEKSRVCQISDPERNYHCFYLLCASPEEKEKYKLGDPRSFHYLNQSSCYELAGVNAAQEYLSTKRAMDIVGISQEEQDAIFRVIAAILHLGNIRFEKSEETDSSVLADKDSKFHLETTAELLMCDPNAVEVALCKRVMITPEEIIERSLDPVAATVSRDGLAKTLYSRLFDWLVQKINISIGQDSNSKWLIGVLDIYGFESFQTNSFEQFCINFTNEKLQQHFNQHVFNMEQEEYTKEGIDWSYLEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSTKLYQTFKDHKRFIKPKLARSDFNVVHYAGVVQYQSELFIDKNKDYVVPEHQVMLSTSKCSFVSGLFPPLSEETAKSAKFSSIGSRFKLQLKHLMEALNLTEPHYIRCVKPNNLLKPGIFENMNVMQQLRSGGVLEAVRIKCAGFPTHRTFHEFLTQVGILAPEILRGNFEEKESCKMILEKIGLTGYQMGQTKIFLRAGHMAELDALRAYMLSNSATIIQKHTRTHFSRKTYTTLRKSSIFVQSICRGELARRQYYHMKRKAATIKIQAYTRGRLARKCYSEIKISVVVLQSVFQAMAARRARDKFRHIRQTRSSTIIQSYWRRHKAPVDYQNLKKASIISQSVNHSINEHEKKVVEISVENESTAMEESSNSLHKESSSSFQDNESIQAIKDFSSPLRDTESNEAIRDFSSPLRDTEKIEALSSPIIVALSLALYSSFLFYLLLVLSYTCLYCK* 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2445 977 ProSiteProfiles IQ motif profile. 757 786 IPR000048 GO:0005515
Mtr1g2445 977 Pfam Myosin N-terminal SH3-like domain 9 45 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mtr1g2445 977 Gene3D - 666 730 - -
Mtr1g2445 977 Gene3D Kinesin motor domain 65 661 IPR036961 -
Mtr1g2445 977 Gene3D Myosin VI head, motor domain, U50 subdomain 311 600 - -
Mtr1g2445 977 ProSiteProfiles IQ motif profile. 734 761 IPR000048 GO:0005515
Mtr1g2445 977 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 786 IPR027417 -
Mtr1g2445 977 Gene3D - 252 309 - -
Mtr1g2445 977 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 783 862 IPR027417 -
Mtr1g2445 977 SMART iq_5 733 755 IPR000048 GO:0005515
Mtr1g2445 977 SMART iq_5 756 778 IPR000048 GO:0005515
Mtr1g2445 977 SMART iq_5 781 803 IPR000048 GO:0005515
Mtr1g2445 977 SMART iq_5 832 854 IPR000048 GO:0005515
Mtr1g2445 977 Gene3D - 733 783 - -
Mtr1g2445 977 Gene3D - 784 836 - -
Mtr1g2445 977 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mtr1g2445 977 PANTHER MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN 6 910 - -
Mtr1g2445 977 Pfam Myosin head (motor domain) 64 719 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mtr1g2445 977 ProSiteProfiles Myosin motor domain profile. 62 731 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mtr1g2445 977 Pfam IQ calmodulin-binding motif 736 754 IPR000048 GO:0005515
Mtr1g2445 977 Pfam IQ calmodulin-binding motif 834 849 IPR000048 GO:0005515
Mtr1g2445 977 Pfam IQ calmodulin-binding motif 758 777 IPR000048 GO:0005515
Mtr1g2445 977 Pfam IQ calmodulin-binding motif 784 802 IPR000048 GO:0005515
Mtr1g2445 977 SMART MYSc_2a 56 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mtr1g2445 977 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mtr1g2445 977 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mtr1g2445 977 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mtr1g2445 977 PRINTS Myosin heavy chain signature 428 456 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mtr1g2445 977 PRINTS Myosin heavy chain signature 481 509 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mtr1g2445 977 CDD MYSc_Myo11 76 719 IPR036018 -
Mtr1g2445 977 PANTHER MYOSIN 6 910 - -
Mtr1g2445 977 Gene3D - 438 622 - -
Mtr1g2445 977 ProSiteProfiles IQ motif profile. 782 809 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2445 Mtr-Chr1 35101898 35116912 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2445 1 899 Myosins gene family AT1G08730 69.145 0.0 1333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2445 K10357 - gmx:100803485 1549.64