Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2442 ATGAGAGATATATTTGAAAAACAATCATCATCTCCCCAAGGTTCAAATTATGCATCAAGTAGTGGCTTGTCTGGGGATGATAAAGAGCTTGGCTATAGAGCTGCAACATCAGTGCATCCATATCTTTTGGCCAAAAACATTTATCTTCATTTCTTAGCCAACAAAATTGACCTCAATTTCGCTCGCATGGTAATGGCAGAGGTGGTGGGTACTTTTATATTGATGTTTTGTGTATGTGGAATCATTGCAAGCACACAACACCAAAATGGTGCAGTTGGCCTTTTGGAATATGCAGCTACAGCAGGATTAACTGTGGTTGTGATAATTTTCTCTATAGGTCCAATTTCTTGTGCACATGTTAACCCAGCTATCACAATAGCCTTTGCAACAATTGGTCACTTTCCATGGTTCAAGGTTCCAATTTATATAATAGCACAAACAATTGGTTCTTTGATGGCAACATATATTGGTAGCCTTGTCTATGGCATAAAATCAGAGGTTATGATGACTCAACCACTCCAAGGGTGTAACTCTGCCTTCTGGGTGGAGGTTATTGCAACATTCATCATCATGTTTTTGGTTACTGCTTTGACATCTGAACATCAATCAGTGGGACATTTATCTGGTTTTGTTGCTGGAATTGCAATTGGGCTTGCTGTACTAATTACAGGCCCTGTGTCAGGTGGATCAATGAATCCAGCAAGATCACTTGGTCCAGCAATTGTGTCATGGAAATTTAAGAATATTTGGATATACATCTTAGCCCCAAGTGGAGGAGCTGTGGCAGGAGCTCTAATGTTTCATTTCCTACGTCTTAAAGACCAACATTGTACCTCCCCAAACACAAGTGAAGTTGGTCATCCAATACCTTTTTGTGCAAGGAGAAGTGGGCCCATGATTTTGCTGGTAGAGAAAAATTGGAGTATATTGTGTGCCAGATTAAAAGGGTTCAGACAAAGATATGACTTAAGAACAGAAGCAATATCTGATGGTGTTTATCATAAGTTGTCATTGTAA 1017 0.3953 MRDIFEKQSSSPQGSNYASSSGLSGDDKELGYRAATSVHPYLLAKNIYLHFLANKIDLNFARMVMAEVVGTFILMFCVCGIIASTQHQNGAVGLLEYAATAGLTVVVIIFSIGPISCAHVNPAITIAFATIGHFPWFKVPIYIIAQTIGSLMATYIGSLVYGIKSEVMMTQPLQGCNSAFWVEVIATFIIMFLVTALTSEHQSVGHLSGFVAGIAIGLAVLITGPVSGGSMNPARSLGPAIVSWKFKNIWIYILAPSGGAVAGALMFHFLRLKDQHCTSPNTSEVGHPIPFCARRSGPMILLVEKNWSILCARLKGFRQRYDLRTEAISDGVYHKLSL* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2442 338 PRINTS Major intrinsic protein family signature 62 81 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr1g2442 338 PRINTS Major intrinsic protein family signature 101 125 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr1g2442 338 PRINTS Major intrinsic protein family signature 138 157 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr1g2442 338 PRINTS Major intrinsic protein family signature 182 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr1g2442 338 PRINTS Major intrinsic protein family signature 213 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr1g2442 338 PRINTS Major intrinsic protein family signature 250 270 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr1g2442 338 MobiDBLite consensus disorder prediction 1 25 - -
Mtr1g2442 338 SUPERFAMILY Aquaporin-like 58 274 IPR023271 -
Mtr1g2442 338 Gene3D Glycerol uptake facilitator protein. 45 284 IPR023271 -
Mtr1g2442 338 MobiDBLite consensus disorder prediction 7 23 - -
Mtr1g2442 338 PANTHER AQUAPORIN NIP7-1-RELATED 11 284 - -
Mtr1g2442 338 PANTHER AQUAPORIN NIP2-1 11 284 IPR034294 -
Mtr1g2442 338 ProSitePatterns MIP family signature. 119 127 IPR022357 -
Mtr1g2442 338 Pfam Major intrinsic protein 59 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2442 Mtr-Chr1 35085932 35088310 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2442 57 281 Major Intrinsic Protein MIP AT4G10380 41.778 1.12e-53 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2442 K09874 - mtr:MTR_1g070385 589.726