Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2439 ATGGAACTCGAAATATTGGTTTCTTTCTTACTTTACTCTGTAACTCTCGTGTCGTTCTTATTCTTAGCCAAAACAAAACTATCAATATCCCCAAAAACACACTCCTCCACCGCCATTCCCAAACCTTATCCAATTTTCGGTTCCATATTTGCTTTTTCCGCCAACTTCCACCGCCGCATACAATGGATAGCTGATATTCTCCAAACCATCCCTTCCTCCACCTTCATCTTCCACCGCGCCTTCGGTTCCCGTCAAGTCTTCACGGCAAACCCTGCCGTGGTGCAACACATTCTCAAAACCAACTTCCCTTGCTACAACAAAGGTCTCTCAAGTCACCAAACCCTACTCGAGTTTCTCGGCGATGGTATCTTCAATACCGATGGTGAAATCTGGAAGGTTCAACGTCAAATATCCAGCCATGAATTCAACACTAAATCCCTCCGAAAATTCGTTGAAACTGTTGTCGATGTTGAACTCAACGATCGCCTTCTTCCAATTCTCTCTGAAGTTTCGGAAAACAAAACAATTCTCGCTAATTTTCAAGATATTCTCCAACGTTTCACGTTTGATAATATTTGCATAATTGCGTTTGGATTTGATCCGGAGTATCTCCTCCCTTCTCTTCCCGAAACAGCGTTTGTTAAAGCCTTTGATGATAGCTCACGAATCAGCAGTGAGAGGTTAAATGCAGCGATTCCATTTCTATGGAAAGTGAAGAAAATATTAAATGTTGGATCAGAGCGACGGTTAAAAGAAGCTGCTGCTGAAGTAAGAGGACTCGCCACAAGAATCGTTAGGGAAAAGAAAAAGGAGCTTGAAGAAAAATCATCGTTGGAATCATTGGATATTCTATCACGATTTTTAAGTTCAGGTCATTCAGATGAATCTTTTGTTGTTGATATTGTAATAAGCTTTATTCTTGCTGGGAGAGATACAACTTCAGCTGCACTCACTTGGTTCTTTTGGTTACTCTCTAAGCATAGTCATGTGGAGAATGAGATTCTAAAGGAAGTTATGGGAAAATCGGAAACGGTTAATTACAATGAGGTGAAGGATATGGTTTACACTCATGCGGCTTTATGTGAGAGTATGAGACTGTATCCTCCGGTTCCCGTGGATGGTAAGGAAGCGGCTTGTGACGACGTTTTGCCGGATGGAACTTTAGTGAAGAAAGGGTGGAGGGTGACATATCATATATATGCTATGGGAAGGTCCGAGAAAATATGGGGACCCGATTGGGCTGAGTTTCGACCTGAGAGATGGTTGAGTCAAGTTGATGATGGAAAGTGGAGCTTTATTGGGATGGATCCTTATAGTTATGCGGTTTTTCAGGCTGGGCCAAGGGTGTGTTTAGGAAAGGAAATGGCGTTCTTGCAGATGAAAAGGGTGGTTGCCGGGATCATGAGGCAGTTTAGGGTGGTTCCTGCAATGGATAAAGGGGTTGAGCCGGAGTTCGCTGCACACCTTACTTCGATAATGAAAGGTGGCTTCCTGGTAAAGATTGAGAAGCGTGGCAGCACAAATGAATGA 1530 0.4307 MELEILVSFLLYSVTLVSFLFLAKTKLSISPKTHSSTAIPKPYPIFGSIFAFSANFHRRIQWIADILQTIPSSTFIFHRAFGSRQVFTANPAVVQHILKTNFPCYNKGLSSHQTLLEFLGDGIFNTDGEIWKVQRQISSHEFNTKSLRKFVETVVDVELNDRLLPILSEVSENKTILANFQDILQRFTFDNICIIAFGFDPEYLLPSLPETAFVKAFDDSSRISSERLNAAIPFLWKVKKILNVGSERRLKEAAAEVRGLATRIVREKKKELEEKSSLESLDILSRFLSSGHSDESFVVDIVISFILAGRDTTSAALTWFFWLLSKHSHVENEILKEVMGKSETVNYNEVKDMVYTHAALCESMRLYPPVPVDGKEAACDDVLPDGTLVKKGWRVTYHIYAMGRSEKIWGPDWAEFRPERWLSQVDDGKWSFIGMDPYSYAVFQAGPRVCLGKEMAFLQMKRVVAGIMRQFRVVPAMDKGVEPEFAAHLTSIMKGGFLVKIEKRGSTNE* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2439 509 Gene3D Cytochrome P450 27 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2439 509 PANTHER CYTOCHROME P450 8 506 - -
Mtr1g2439 509 Pfam Cytochrome P450 40 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2439 509 PANTHER CYTOCHROME P450 FAMILY-DEPENDENT FATTY ACID HYDROXYLASE 8 506 - -
Mtr1g2439 509 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2439 509 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2439 509 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2439 509 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2439 509 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2439 509 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2439 509 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2439 509 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2439 509 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2439 509 SUPERFAMILY Cytochrome P450 40 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2439 Mtr-Chr1 35049276 35051132 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2439 2 504 Cytochrome P450 AT5G63450 44.882 6.31e-146 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2439 K20769 K20768 ag:AAG33645 778.859