Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2436 ATGGAAAATAATGTTGAAGAGAATATGCAGATGGATGAATCTGTTGCATCCGTGGAGGGACTAGAAGGCTTGTCAACTGGGGTAACTGACGAAGCAACATTTGAGATTGATGACGACGATGTTGTTAGTGTTGAGGCTGGGGAAGGTAGCGAAGAAATTATATATATTGATAACAAGGAGGATATTCTTTGCATGGACCTGAAGGGAACAAGTCCCCATGAGACAAGGAAATTTGAGTTTTCAAGCTTGGATATGGCTTATGAGTTCTATAATTGGTATGCTAGAATGAATGGGTTTGCGGTCCGCAAGAGCAAGATGATTAAAAGCAATAAAGGGGAAATATTACAGCAAACCTTTGTCTGCCACAGACAAGGGTTTAGGGAGGATAGAGGTTTAACAATAGAAAACCGTAAGCGTGAGTGTAAACCCAAGACTCGGTGTGGATGTGAAGCAAAATTTCGGGTGCATATAGATATGTTCTCACAACGTTGGTTGATAACTGTTTTTACTGATCAACACAACCATGAGCTTTTAGATGAAGAGTACCATGGAATGCTTGCTGCACATCGAAAAATGAAAGAGTCGGATATAATGCAGATGAACGACATGTTGAAGGTTGGGATAGGGCCGTCTCAATTCTATAGTTCTTTGGCAAACCAATCAGGAGGGTATGAAAAGATAGGGTTTCGAAAGAAGGATATATATAATCAAATAGGAAAGCAACGTCTTTTGAAACGGTGTGATGGTAAAAATGCTTTACAATATCTTCATGGGCTGGCATCAAATGACTCGTTGATGTTTTATCGCCACACCGTTGACGGAGAAGGTAGGCTTGAACACCTGTTTTGGTGCGACGGTATTAGCCAAATGGATTATGGTGCTTATGGTGATGTGTTGGCATTTGATGCAACATATGGAACGAACAAACGTCATGTTAAGTAA 942 0.4055 MENNVEENMQMDESVASVEGLEGLSTGVTDEATFEIDDDDVVSVEAGEGSEEIIYIDNKEDILCMDLKGTSPHETRKFEFSSLDMAYEFYNWYARMNGFAVRKSKMIKSNKGEILQQTFVCHRQGFREDRGLTIENRKRECKPKTRCGCEAKFRVHIDMFSQRWLITVFTDQHNHELLDEEYHGMLAAHRKMKESDIMQMNDMLKVGIGPSQFYSSLANQSGGYEKIGFRKKDIYNQIGKQRLLKRCDGKNALQYLHGLASNDSLMFYRHTVDGEGRLEHLFWCDGISQMDYGAYGDVLAFDATYGTNKRHVK* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2436 313 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 57 310 - -
Mtr1g2436 313 Pfam FAR1 DNA-binding domain 88 178 IPR004330 -
Mtr1g2436 313 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 57 310 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2436 Mtr-Chr1 35032154 35034981 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr1g2436 FAR1 4.1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2436 - - mtr:MTR_1g070355 641.728