Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2434 ATGGAACTCGAAACTTTGCTTTCTTTGTTACTTTTCTCAGCACCACTCGTTTGGTTCTTATTCTTAGCCACTAAAAAACAATCCAAATTCCAAAAAACACCCTCCTCCACCGCCATTCCCAAAACTTACCCTATCATTGGTTCTGTCTTTTCCATTTACGCCAACTTCCACCGCCGTGTCCACTGGATCTCCGACATCCTCCAAACCATCCCTTCTTCCACCTTCATCCTCCACCGCTCCTTCGGTTCCCGCCAAGTTTTCACGGCAAACCCCGCCGTAGTGCAACATATTCTCAAAACCAACTTCCCTTGCTACCGCAAAGGTCTCACGCTTAAACGTTCCGTCGGTGATTTTCTCGGGGACGGCATCTTCAGTGCCGACGGTGAAACTTGGAAGTTTCAACGACAAATTTCCAGCCATGAATTCAACACTAAGTCTCTACGTAAATTTGTCGAAACTGTCGTCGAGGTTGAACTCAATGATCGTCTGCTTCCTATTCTCTCCGAAGCTTCCAAAAACCAAACGGTTCTGCTTGATTTTCAAGATATCCTCCAACGTTTTACGTTCGATAGTATCTGCAGAATCGCGTTTGGATTCGATCCGGAGTACTTACATTCTTCTCTTCCCAAAACCATGTTTGTAAAAGCCTTTGACGATAGCTCACTAATTAGCAGTGTGAGATTTAACGCTGCGATTCCATTGATATGGAAAGTGAAGAAAATATTAAACATAGGGATCGAGCGACGATTGAAAGAAGCCGTCGCTGAAGTAAGAGGACTTGCTACAAGAATCGTTAGGGAAAAGAAAAAAGAGCTTAAAGAAAAAGCAACTTTGGAATCAGTTGATCTTTTATCGCGGTTTTTAAGTTCGGGTCATTCGGATGAATCATTTGTAGTTGATATTGTAATAAGCTTTATTCTTGCTGGGAAAGATACAACTTCAGCTGCACTCACGTGGTTCTTTTGGCTACTCTCTAAGCATAGTCATGTGGAGAATGAAATTCTCAAAGAGATTACCGGAAAATCAGAAATAGTTAGTTACGATGAGGTGAAGGATATGGTTTATACTCATGCGTCGTTATGCGAGAGTATGAGACTTTATCCTCCAGTTCCAGTGGATACTAAAGAAGCAGCGTACAATGATGTTTTGCCAGATGGAACTTTTGTGAAGAAAGGGTGGAGAGTGGCGTATCATATATATGCTATGGGAAGGTCGGAGAAAATATGGGGACTTGATTGGGCTGAGTTTCGACCGGAGAGGTGGTTGAGTCAAGATGAGGATGGGAAGTGGAGTTTTATTGGGATGGATCCTTATAGTTATGCGGTTTTTCAAGCTGGGCCGAGGGTGTGTTTAGGAAAGGAAATGGCGTTCTTGCAGATGAAGAGGGTGGTTGCAGGGATCATGAGGCAGTTTAGGGTGGTTCCTGCAATGGATAAAGGGGTTGAGCCGGAGTACATTGCACACCTTACCTCATTGATGAAAGGTGGCTTCTCGGTAAGAATTGAGAAGCGAAGCCACAAAGATCAATAA 1530 0.4353 MELETLLSLLLFSAPLVWFLFLATKKQSKFQKTPSSTAIPKTYPIIGSVFSIYANFHRRVHWISDILQTIPSSTFILHRSFGSRQVFTANPAVVQHILKTNFPCYRKGLTLKRSVGDFLGDGIFSADGETWKFQRQISSHEFNTKSLRKFVETVVEVELNDRLLPILSEASKNQTVLLDFQDILQRFTFDSICRIAFGFDPEYLHSSLPKTMFVKAFDDSSLISSVRFNAAIPLIWKVKKILNIGIERRLKEAVAEVRGLATRIVREKKKELKEKATLESVDLLSRFLSSGHSDESFVVDIVISFILAGKDTTSAALTWFFWLLSKHSHVENEILKEITGKSEIVSYDEVKDMVYTHASLCESMRLYPPVPVDTKEAAYNDVLPDGTFVKKGWRVAYHIYAMGRSEKIWGLDWAEFRPERWLSQDEDGKWSFIGMDPYSYAVFQAGPRVCLGKEMAFLQMKRVVAGIMRQFRVVPAMDKGVEPEYIAHLTSLMKGGFSVRIEKRSHKDQ* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2434 509 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2434 509 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2434 509 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2434 509 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2434 509 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2434 509 PANTHER CYTOCHROME P450 FAMILY-DEPENDENT FATTY ACID HYDROXYLASE 8 507 - -
Mtr1g2434 509 SUPERFAMILY Cytochrome P450 40 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2434 509 Pfam Cytochrome P450 40 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2434 509 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2434 509 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2434 509 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2434 509 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2434 509 Gene3D Cytochrome P450 20 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g2434 509 PANTHER CYTOCHROME P450 8 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2434 Mtr-Chr1 35000070 35002023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2434 2 508 Cytochrome P450 AT5G63450 43.750 5.84e-148 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2434 K20769 K20768 ag:AAG33645 796.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2434 1 35000070 35002023 Mtr1g2434 1 35000070 35002023 ECH
Mtr7g2873 7 45510133 45511835 Mtr1g2434 1 35000070 35002023 PCT