LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr1g2434	ATGGAACTCGAAACTTTGCTTTCTTTGTTACTTTTCTCAGCACCACTCGTTTGGTTCTTATTCTTAGCCACTAAAAAACAATCCAAATTCCAAAAAACACCCTCCTCCACCGCCATTCCCAAAACTTACCCTATCATTGGTTCTGTCTTTTCCATTTACGCCAACTTCCACCGCCGTGTCCACTGGATCTCCGACATCCTCCAAACCATCCCTTCTTCCACCTTCATCCTCCACCGCTCCTTCGGTTCCCGCCAAGTTTTCACGGCAAACCCCGCCGTAGTGCAACATATTCTCAAAACCAACTTCCCTTGCTACCGCAAAGGTCTCACGCTTAAACGTTCCGTCGGTGATTTTCTCGGGGACGGCATCTTCAGTGCCGACGGTGAAACTTGGAAGTTTCAACGACAAATTTCCAGCCATGAATTCAACACTAAGTCTCTACGTAAATTTGTCGAAACTGTCGTCGAGGTTGAACTCAATGATCGTCTGCTTCCTATTCTCTCCGAAGCTTCCAAAAACCAAACGGTTCTGCTTGATTTTCAAGATATCCTCCAACGTTTTACGTTCGATAGTATCTGCAGAATCGCGTTTGGATTCGATCCGGAGTACTTACATTCTTCTCTTCCCAAAACCATGTTTGTAAAAGCCTTTGACGATAGCTCACTAATTAGCAGTGTGAGATTTAACGCTGCGATTCCATTGATATGGAAAGTGAAGAAAATATTAAACATAGGGATCGAGCGACGATTGAAAGAAGCCGTCGCTGAAGTAAGAGGACTTGCTACAAGAATCGTTAGGGAAAAGAAAAAAGAGCTTAAAGAAAAAGCAACTTTGGAATCAGTTGATCTTTTATCGCGGTTTTTAAGTTCGGGTCATTCGGATGAATCATTTGTAGTTGATATTGTAATAAGCTTTATTCTTGCTGGGAAAGATACAACTTCAGCTGCACTCACGTGGTTCTTTTGGCTACTCTCTAAGCATAGTCATGTGGAGAATGAAATTCTCAAAGAGATTACCGGAAAATCAGAAATAGTTAGTTACGATGAGGTGAAGGATATGGTTTATACTCATGCGTCGTTATGCGAGAGTATGAGACTTTATCCTCCAGTTCCAGTGGATACTAAAGAAGCAGCGTACAATGATGTTTTGCCAGATGGAACTTTTGTGAAGAAAGGGTGGAGAGTGGCGTATCATATATATGCTATGGGAAGGTCGGAGAAAATATGGGGACTTGATTGGGCTGAGTTTCGACCGGAGAGGTGGTTGAGTCAAGATGAGGATGGGAAGTGGAGTTTTATTGGGATGGATCCTTATAGTTATGCGGTTTTTCAAGCTGGGCCGAGGGTGTGTTTAGGAAAGGAAATGGCGTTCTTGCAGATGAAGAGGGTGGTTGCAGGGATCATGAGGCAGTTTAGGGTGGTTCCTGCAATGGATAAAGGGGTTGAGCCGGAGTACATTGCACACCTTACCTCATTGATGAAAGGTGGCTTCTCGGTAAGAATTGAGAAGCGAAGCCACAAAGATCAATAA	1530	0.4353	MELETLLSLLLFSAPLVWFLFLATKKQSKFQKTPSSTAIPKTYPIIGSVFSIYANFHRRVHWISDILQTIPSSTFILHRSFGSRQVFTANPAVVQHILKTNFPCYRKGLTLKRSVGDFLGDGIFSADGETWKFQRQISSHEFNTKSLRKFVETVVEVELNDRLLPILSEASKNQTVLLDFQDILQRFTFDSICRIAFGFDPEYLHSSLPKTMFVKAFDDSSLISSVRFNAAIPLIWKVKKILNIGIERRLKEAVAEVRGLATRIVREKKKELKEKATLESVDLLSRFLSSGHSDESFVVDIVISFILAGKDTTSAALTWFFWLLSKHSHVENEILKEITGKSEIVSYDEVKDMVYTHASLCESMRLYPPVPVDTKEAAYNDVLPDGTFVKKGWRVAYHIYAMGRSEKIWGLDWAEFRPERWLSQDEDGKWSFIGMDPYSYAVFQAGPRVCLGKEMAFLQMKRVVAGIMRQFRVVPAMDKGVEPEYIAHLTSLMKGGFSVRIEKRSHKDQ*	510

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Mtr1g2434	509	PRINTS	E-class P450 group I signature	297	314	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Mtr1g2434	509	PRINTS	E-class P450 group I signature	317	343	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Mtr1g2434	509	PRINTS	E-class P450 group I signature	357	375	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Mtr1g2434	509	PRINTS	E-class P450 group I signature	440	450	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Mtr1g2434	509	PRINTS	E-class P450 group I signature	450	473	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Mtr1g2434	509	PANTHER	CYTOCHROME P450 FAMILY-DEPENDENT FATTY ACID HYDROXYLASE	8	507	-	-
Mtr1g2434	509	SUPERFAMILY	Cytochrome P450	40	504	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Mtr1g2434	509	Pfam	Cytochrome P450	40	488	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Mtr1g2434	509	PRINTS	P450 superfamily signature	308	325	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Mtr1g2434	509	PRINTS	P450 superfamily signature	358	369	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr1g2434	Mtr-Chr1	35000070	35002023	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr1g2434	2	508	Cytochrome P450	AT5G63450	43.750	5.84e-148	434

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr1g2434	K20769		K20768	ag:AAG33645	796.964

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr1g2434	1	35000070	35002023	Mtr1g2434	1	35000070	35002023	ECH
	Mtr7g2873	7	45510133	45511835	Mtr1g2434	1	35000070	35002023	PCT

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