Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2432 ATGGGCATGCCCGAAAACATAATTGTTGGTTCTCACGTTTGGGTTGCCGATCCAGAATTAGTTTGGATTGATGGAGTAGTACTAAATATTAATGGAGAAGATGCTGAAATTCAAACTAGCAATGAGAAGAAGGTAGTTTCCCGTTTGTCAAAATTACATCCCAAGGATACAGATGCTCCTACTGATGGTTTTGATGACATGACCAAGCTTGCTTATTTGCATGAGCCAGGAGTGCTTTATAATTTGGAAAGCCGATACAAGATCAATGAAATCTATACTTATTCTGGAAATATTCTTATTGCGATCAATCCCTTTCAAAGTCTTCCACACCTGTATGATGCTAATGCAATGAAAAGATACAAGGGAGAGAGAATCGGAAATTTAAGCCCACATGTTTTTGCTATTGCTGAAGCAGCATATAGGGCTATGATTACTGAGGAGAAGAGCAACTCTATTCTTGTTAGTGGTGAGAGCGGCGCTGGTAAGACAGAAACCACCAAAATGCTTATGCTTTACTTGGCATATTTGGGTGGTCACACTGCATCTGAAGGACGGACTGTTGAACAGCAAGTTCTAGAATCAAACCCAGTACTTGAGGCATTTGGTAATGCAAAAACAGTTAGAAATGACAATTCCAGCCGTTTTGGAAAATTTGTTGAGATTCAATTTGATAAGTATGGACGAATATCCGGTGCAGCCATTAGAACTTATCTTCTCGAGAAATCTCGTGTTTGCCAAATCTCAGATCCAGAGCGTAATTATCACTGTTTCTACCTTCTCTGTGCTTCTCCTCCTGAGGAAAAGGAGAAATATAAGTTGGGGGACCCGAGATCATTTCATTACCTTAATCAATCCAGTTGCTATGAATTAGCTGGTGTTAATGCTGCTCAAGAGTATCTTAGCACCAAAAGAGCCATGGATATTGTGGGAATCAGCCAGGAGGAGCAGGATGCAATTTTCAGAGTTATTGCTGCTATTCTCCATCTTGGAAACATTAAATTTGAAAAATCAGAAGAAGAAACAGATTCATCAGTTCTAGCAGATAAAGACTCCAAGTTCCATCTCGAAACAACTGCAGAACTTCTAATGTGTGATTCTAATGCTGTGGAAGTTGCACTATGTAAGCGTGTGATGATCACCCCTGAAGAAATCATCGAAAGAAGTCTTGATCCTGTTGCCGCAACAGTTAGCAGGGATGGTTTGGCGAAGACATTATATTCTCGTTTGTTTGACTGGTTAGTCCAGAAAATTAATCTCTCCATTGGGCAGGATAGTAACTCGAAATGTCTCATTGGTGTTCTTGACATATATGGCTTTGAAAGCTTTCAAACTAATAGTTTTGAGCAGTTTTGTATTAATTTTACGAATGAAAAGCTGCAGCAGCACTTCAACCAGCACGTTTTTAAGATGGAGCAAGAGGAATACACAAAAGAAGCGATTGATTGGAGCTACTTAGAATTTGTAGACAATCAAGATGTACTAGATCTCATTGAAAAGAAACCAGGTGGAATAATTGCTCTGCTCGATGAGGCTTGCATGTTTCCCAAATCAACTCATGAAACATTTTCAACAAAGCTTTATCAGACATTCAAAGATCACAAACGCTTCATCAAGCCAAAATTGGCACGCTCAGACTTCACTGTTGTTCATTATGCAGGAGTGGTCCAGTATCAATCTGAGCATTTCATAGACAAAAACAAAGACTATGTTGTTCCTGAACATCAAGTCATGCTAAGTACTTCCAAATGTTCATTTGTATCAGGCCTTTTTCCTCCACTTTCTGAGGAGACAGCAAAATCTGCTAAGTTTTCTTCTATTGGCTCTCGTTTTAAGCTACAATTACAACATTTGATGGAAGCGCTCAATCTGACAGAGCCCCACTATATTAGATGTGTGAAGCCGAATACTCTATTAAAACCTGGGATATTTGAGAATATGAACGTTATGCATCAATTACGTTCTGGTGGTGTTCTTGAAGCAGTGAGAATAAAATGTGCTGGATTTCCCACTCACAGGACCTTTCATGAATTTTTAACTCGAGTAGGCATTCTTGCTCCAGAGATTCTTCGAGGGAACTTCGAAGAAAAGGAATCGTGTAAAATGATTTTAGAGAAGATTGGGCTGACAGGTTATCAGATAGGGCAAACAAAATTATTCCTAAGAGCTGGTCATATGGCAGAATTGGATGCTCGGAGAGCATACATGCTTAGCAACTCTGCAACAATTATCCAAAAGCATACTAGAACTCATTTTAGTCAGAAAAGATATACTACACTGCGGAAGTCCTCTTTGTTTTTGCAGTCTATTTGCAGAGGAGAACTGGCACGGAGACAATATTATCACATGAAGAGGAAAGCAGCTGCCATCAAAATTCAAGCCTATACACGTGGAAGAATAGCCAGAAAATGCTATTCTGAAATGAAGACTTCTGTCGTTGTCTTACAGTCAGGTTTTCAGGCAATGGCTGCTCGACGTGCTCGTGATAAATTCAGACATATAAGGCAAACTAGGTCATCAACTATTATTCAGTCCTATTGGCGGCGACATAAAGCTCTCGTGGACTATCAGAACCTTAAGAAAGCATCAATCATTTCACAAAGTGTCAATCACTCCAATGATGAACAAGAGCAGAAGGTTATGGAGATATCAGTTGAAAATGAAAGTACTGCCATGGAAGAATCTTCAAATTCACTCCGCGAGGAATCCTCAAGTTCTTTCCAAGATAATGAACGCATTGAAGCTATTAAAGATTTCTCAAGTCCCATCATAGATGCTGAAAGAAATGAAGCTATTAGGGATTGCTCTAGTCCCCACAGAGACACTGAAAGCAATGAAAATATTAGAGATTTCTCTAGTCCCCTTGGAGACACGGAAAAGATTGAGGCTCTTTCTGCAGAAATAAAAACTTTAAAGTTCATGTTGCAGGAAGAAAAACAAAAAACTGATGAATATGAAAGGAAATATGTAGAAGCTCAAGGATCCAGCGAAGAGTTACGCAAAAAGTTAACTGAAACCGAAAAAAGAGTATATCAGCTTCAGGACTCATTGAACAGGATGATATCTTCCATGTCAAGTCAAGTTGCCGAGCTGAAGACAATCTTGAGTACTTCATCAAGATTGAGTTCAACTTTTCGACCTATTGCTAGAGTTGACGTTGCTTCCAGTAACTCTGATTCTTCATCTACAGACTCTGATTTCACATTTCCAGCACCTGTTGCAAATTCAGAAGCATTATCTTCTACCCAACTAGTAGTTCAGGATGTCACTGCAGCTGAAGGATCAGGATCTGGAAGTGAAAAAGAAGCCTCTGGGGAAACAACGAAGAAAGTCCGAGAAAAGGATGAAGGTTGCATTGGCTAG 3360 0.3952 MGMPENIIVGSHVWVADPELVWIDGVVLNINGEDAEIQTSNEKKVVSRLSKLHPKDTDAPTDGFDDMTKLAYLHEPGVLYNLESRYKINEIYTYSGNILIAINPFQSLPHLYDANAMKRYKGERIGNLSPHVFAIAEAAYRAMITEEKSNSILVSGESGAGKTETTKMLMLYLAYLGGHTASEGRTVEQQVLESNPVLEAFGNAKTVRNDNSSRFGKFVEIQFDKYGRISGAAIRTYLLEKSRVCQISDPERNYHCFYLLCASPPEEKEKYKLGDPRSFHYLNQSSCYELAGVNAAQEYLSTKRAMDIVGISQEEQDAIFRVIAAILHLGNIKFEKSEEETDSSVLADKDSKFHLETTAELLMCDSNAVEVALCKRVMITPEEIIERSLDPVAATVSRDGLAKTLYSRLFDWLVQKINLSIGQDSNSKCLIGVLDIYGFESFQTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEAIDWSYLEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSTKLYQTFKDHKRFIKPKLARSDFTVVHYAGVVQYQSEHFIDKNKDYVVPEHQVMLSTSKCSFVSGLFPPLSEETAKSAKFSSIGSRFKLQLQHLMEALNLTEPHYIRCVKPNTLLKPGIFENMNVMHQLRSGGVLEAVRIKCAGFPTHRTFHEFLTRVGILAPEILRGNFEEKESCKMILEKIGLTGYQIGQTKLFLRAGHMAELDARRAYMLSNSATIIQKHTRTHFSQKRYTTLRKSSLFLQSICRGELARRQYYHMKRKAAAIKIQAYTRGRIARKCYSEMKTSVVVLQSGFQAMAARRARDKFRHIRQTRSSTIIQSYWRRHKALVDYQNLKKASIISQSVNHSNDEQEQKVMEISVENESTAMEESSNSLREESSSSFQDNERIEAIKDFSSPIIDAERNEAIRDCSSPHRDTESNENIRDFSSPLGDTEKIEALSAEIKTLKFMLQEEKQKTDEYERKYVEAQGSSEELRKKLTETEKRVYQLQDSLNRMISSMSSQVAELKTILSTSSRLSSTFRPIARVDVASSNSDSSSTDSDFTFPAPVANSEALSSTQLVVQDVTAAEGSGSGSEKEASGETTKKVREKDEGCIG* 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2432 1119 Gene3D - 735 785 - -
Mtr1g2432 1119 Gene3D - 786 839 - -
Mtr1g2432 1119 MobiDBLite consensus disorder prediction 934 953 - -
Mtr1g2432 1119 Pfam Myosin N-terminal SH3-like domain 9 46 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mtr1g2432 1119 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 786 IPR027417 -
Mtr1g2432 1119 MobiDBLite consensus disorder prediction 886 906 - -
Mtr1g2432 1119 Coils Coil 960 1015 - -
Mtr1g2432 1119 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mtr1g2432 1119 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mtr1g2432 1119 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mtr1g2432 1119 PRINTS Myosin heavy chain signature 430 458 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mtr1g2432 1119 PRINTS Myosin heavy chain signature 483 511 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mtr1g2432 1119 SMART iq_5 834 856 IPR000048 GO:0005515
Mtr1g2432 1119 SMART iq_5 783 805 IPR000048 GO:0005515
Mtr1g2432 1119 SMART iq_5 758 780 IPR000048 GO:0005515
Mtr1g2432 1119 SMART iq_5 735 757 IPR000048 GO:0005515
Mtr1g2432 1119 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 785 864 IPR027417 -
Mtr1g2432 1119 Gene3D - 938 1048 - -
Mtr1g2432 1119 Gene3D - 668 734 - -
Mtr1g2432 1119 PANTHER MYOSIN 6 1051 - -
Mtr1g2432 1119 Gene3D - 252 310 - -
Mtr1g2432 1119 MobiDBLite consensus disorder prediction 886 903 - -
Mtr1g2432 1119 SMART MYSc_2a 56 734 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mtr1g2432 1119 ProSiteProfiles IQ motif profile. 759 788 IPR000048 GO:0005515
Mtr1g2432 1119 MobiDBLite consensus disorder prediction 1079 1093 - -
Mtr1g2432 1119 CDD MYSc_Myo11 76 721 IPR036018 -
Mtr1g2432 1119 ProSiteProfiles IQ motif profile. 784 811 IPR000048 GO:0005515
Mtr1g2432 1119 Pfam Myosin head (motor domain) 65 721 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mtr1g2432 1119 Gene3D Myosin VI head, motor domain, U50 subdomain 312 602 - -
Mtr1g2432 1119 ProSiteProfiles Myosin motor domain profile. 62 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mtr1g2432 1119 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mtr1g2432 1119 MobiDBLite consensus disorder prediction 1102 1119 - -
Mtr1g2432 1119 PANTHER MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN 6 1051 - -
Mtr1g2432 1119 Gene3D - 440 624 - -
Mtr1g2432 1119 MobiDBLite consensus disorder prediction 1079 1119 - -
Mtr1g2432 1119 Pfam IQ calmodulin-binding motif 836 852 IPR000048 GO:0005515
Mtr1g2432 1119 Pfam IQ calmodulin-binding motif 738 756 IPR000048 GO:0005515
Mtr1g2432 1119 Pfam IQ calmodulin-binding motif 760 779 IPR000048 GO:0005515
Mtr1g2432 1119 Pfam IQ calmodulin-binding motif 786 804 IPR000048 GO:0005515
Mtr1g2432 1119 Gene3D Kinesin motor domain 65 663 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2432 Mtr-Chr1 34919939 34937857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2432 1 1019 Myosins gene family AT1G54560 63.454 0.0 1386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2432 K10357 - gmx:100803485 1732.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2432 1 34919939 34937857 Mtr1g2432 1 34919939 34937857 ECH