Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2431 ATGGAAGGAAATTACTACCTGAACAGAAACACAAGAGATCATGATCATCATCATCATAACTTGGGATTTGAGGAGCATTCATGGGGAACATCATGGCCAGCAAGAAACTATTCTTGTAGTTTTTGCAAAAGAGAGTTTAGGTCAGCTCAAGCTTTAGGTGGACATATGAATGTCCATAGAAGAGATAGGGCAAGATTAAGATCATCATTAATATCTTCTTGGGTTAATTCTGATCAATGCCCTAATAATAATAAACCAAACCCTACCCCTAGCTCAACTACTCCTTGTTCTTCTCCACTTTATCTCTCTTTATCTTCTCCACCTTCACCTTCCTTACCTCATACTATCCATGATGATAAGAAACCAAGATTAACACCTTCTCTATCTCTTCCTCTTTTAAATCCTCAAAGAAGTGAAATCATGATGAGTAAGAGCATCAAGAGCTATGAAGAGGTGAAGAAACACAATGTTTTGATGAATAATGAGCAAAACATTACATTGGAGTTAGGAATAGGGTTGTTTAAACACCAAGAGGAAAAGTTAGATTTGGAGCTTCATCTCTAG 564 0.3688 MEGNYYLNRNTRDHDHHHHNLGFEEHSWGTSWPARNYSCSFCKREFRSAQALGGHMNVHRRDRARLRSSLISSWVNSDQCPNNNKPNPTPSSTTPCSSPLYLSLSSPPSPSLPHTIHDDKKPRLTPSLSLPLLNPQRSEIMMSKSIKSYEEVKKHNVLMNNEQNITLELGIGLFKHQEEKLDLELHL* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2431 187 Pfam C2H2-type zinc finger 37 61 - -
Mtr1g2431 187 PANTHER OS07G0101800 PROTEIN 12 187 - -
Mtr1g2431 187 SUPERFAMILY beta-beta-alpha zinc fingers 34 63 IPR036236 -
Mtr1g2431 187 PANTHER TRANSCRIPTIONAL REGULATOR SUPERMAN 12 187 - -
Mtr1g2431 187 Gene3D Classic Zinc Finger 13 92 - -
Mtr1g2431 187 MobiDBLite consensus disorder prediction 75 127 - -
Mtr1g2431 187 ProSitePatterns Zinc finger C2H2 type domain signature. 39 59 IPR013087 -
Mtr1g2431 187 MobiDBLite consensus disorder prediction 75 112 - -
Mtr1g2431 187 SMART c2h2final6 37 59 IPR013087 -
Mtr1g2431 187 ProSiteProfiles Zinc finger C2H2 type domain profile. 37 64 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2431 Mtr-Chr1 34900072 34901186 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2431 29 187 C2H2 Transcription Factor Family AT3G23130 42.169 2.36e-25 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr1g2431 zf-C2H2_6 1e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2431 - - mtr:MTR_1g070265 292.352