Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2421 ATGGGTACCAATTTGCATCAACTACTAAGAAGCCTTTGTTTGGATACTGATTGGAAGTATGCTATCTTTTGGAAGCTACAACATTGTGCTAGAATGATCTTGACATGGGAGGATGCTTACTATGACAACCCTGACAATTGTGATTCTTCCCAAAGTATGTGTTCCCAGAACACCTTAGAGCAGATCTGTGTTGGAGATTTTTCACATGACCCTCTAGGATTATCTGTTGCGAAGATGTCGTATCATGTATATTCGTTAGGGGAAGGTATTGTTGGACAGGTAGCTGTTACTGGAAAACATCAGTGGATCTGTGCAGATAATCAAGTTACAAGTTCTAGTCCATCTTTTAAGACAATTGTTGTTGTAGCAGTACCACCACTCGGAGTTGTTCAACTTGGCTCCTTAAATAAAGTTGGTGAAGACATGGGGTTTGTAACTCACATAAGAAGTCTCTTTTTGTCTACTCGTGATCACACATTAGGTTACCTTCCTAGTCAAATCCAAAGTGTGAAACATAACACACAGAAAACCATGACGGGAGAAACACTTGATATGGTAACGCCCTTCCAATGTCCTGGGAAAAACTATTCGCCTCCTACTGTTTATCAGAAAATGACTATTGATGTGGCCAAGCATGAGGGGCTTGAAATTGACAACGATCGAGGTTCCATCTTGCTTCAATCGCTGTCAAATATGATGACTGCAGAGAATACAAAACAAGTAGGGATGAAACCTTCAAATGAAAGGATGTGTGAAGGGAGCAATAATGGCTGCAAAGATACTAGTTTGAAACCAGACAAAAATGTCTCATCGTTTTTACGCAATTCAGTTATGAATTATAATAGTACCAAAGATTTAACAAGTCCGTCAGAAAATGTAGAAGCTGATACTGTGATGTCAAAGTTTCAGACCGAGTCTTTTTACGAGGATACCTCATACACGTTGAAATTTCCTGCTGGTTATGAGTTACATGAAGCACTTGGACCAGGTTTTCTCAAAGAGAGTAGATATTTTGATTGGGCAGTACAAGGAAATCAAGATAGTAAAGCTTCTGAGATGTCAGATGAGATTAGCTGCAGCCAATTGACTTTTGAATCTCGTCCGGAACATCTTTTGGAAGCAGTGGTGACCAGAGTTTGCCATAGTAATAATAATATTGTTGATAACGAGGCATCATTTTCTACATCAGGGCAGGACACAATAGTCTCTGGAAGAAAACCTGAAGCTTCTATTCAAAATGTCCGAACTATTAATTCAGAAGGCTATTCAATTGATCAATCATCTATTATTAAAGAGGATAGGCATCATCGTAGTCTGAGTTTGTCAGGGATATGCGGCGTGATATCCCCTAAAAGTTTTTCTTCTACATGTCCTAGCTCGTGTAGTAACCAGTTTGAGAGGTCTTCTGAACCATCTAAAAACAGCAAAAAGAGGGCTAGGCCAGGGGAAAGTTGTAGGCCTAGACCAAGGGACAGACAACTGATCCAAGACCGTATCAAGGAGTTAAGAGAACTGGTGCCAAACGGAGCAAAGTGCAGTATTGATTCACTGTTGGAGTGCACAATAAAGCACATGCTCTTTCTCCAAAGTGTAACTAAGCATGCTGACAAGATAAATAAATTTTCTAAAACGAAGACAAAGTTGCATCACATGGAAAATGACATTCATGGATCCTCTGATTATCAACAACAACAGGGTTCAAGTTGGGCAATGGAGGTAGGAGGCCATCTGAAAATTCATTCAGTATTAGTAGAAAATCTTAGTAAGAATGGGCAGATGCTTGTTGAGATGCTATGTGAGGAGTGCAGCCATTTTCTTGAGATAGCAGAAGCCATAAGAAGCTTGGGACTGACAATTTTGAATGGTGCAAGTGAAGCTCGTGGTGAGAAGACATGCATGTGTTTTGTGGTTGAGGGCCAAAACAACAGAAATTTACATAGACTGGACATCTTGTGGCCGCTTGTTCAATTATTGCAGTCCAAGAGCACCACGCATTCATGA 2001 0.4023 MGTNLHQLLRSLCLDTDWKYAIFWKLQHCARMILTWEDAYYDNPDNCDSSQSMCSQNTLEQICVGDFSHDPLGLSVAKMSYHVYSLGEGIVGQVAVTGKHQWICADNQVTSSSPSFKTIVVVAVPPLGVVQLGSLNKVGEDMGFVTHIRSLFLSTRDHTLGYLPSQIQSVKHNTQKTMTGETLDMVTPFQCPGKNYSPPTVYQKMTIDVAKHEGLEIDNDRGSILLQSLSNMMTAENTKQVGMKPSNERMCEGSNNGCKDTSLKPDKNVSSFLRNSVMNYNSTKDLTSPSENVEADTVMSKFQTESFYEDTSYTLKFPAGYELHEALGPGFLKESRYFDWAVQGNQDSKASEMSDEISCSQLTFESRPEHLLEAVVTRVCHSNNNIVDNEASFSTSGQDTIVSGRKPEASIQNVRTINSEGYSIDQSSIIKEDRHHRSLSLSGICGVISPKSFSSTCPSSCSNQFERSSEPSKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLECTIKHMLFLQSVTKHADKINKFSKTKTKLHHMENDIHGSSDYQQQQGSSWAMEVGGHLKIHSVLVENLSKNGQMLVEMLCEECSHFLEIAEAIRSLGLTILNGASEARGEKTCMCFVVEGQNNRNLHRLDILWPLVQLLQSKSTTHS* 667
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2421 666 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 299 664 IPR043561 GO:0003700|GO:0006355
Mtr1g2421 666 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 172 297 IPR043561 GO:0003700|GO:0006355
Mtr1g2421 666 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 170 IPR043561 GO:0003700|GO:0006355
Mtr1g2421 666 MobiDBLite consensus disorder prediction 463 491 - -
Mtr1g2421 666 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 152 IPR025610 -
Mtr1g2421 666 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 299 664 - -
Mtr1g2421 666 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 170 - -
Mtr1g2421 666 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 172 297 - -
Mtr1g2421 666 MobiDBLite consensus disorder prediction 470 491 - -
Mtr1g2421 666 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 479 528 IPR011598 GO:0046983
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr1g2421 Mtr-Chr1 34776018 34781947 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2421 1 662 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 39.765 4.13e-143 433
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2421 - - cam:101504684 1018.84
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2421 1 34776018 34781947 Mtr1g2421 1 34776018 34781947 ECH
Mtr7g2885 7 45639013 45645449 Mtr1g2421 1 34776018 34781947 PCT