Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2420 ATGACTAACAATGAACAAACATTTTGGGTGGTGTATGAGAAATTTAAGCCTCACCTTTTTATGGTTCTTGTTCAGGTGGCTCTTGTGCTTCAATATTTCCTAGTAGAGGCTTCATTTAATAATGGAATGGACCCTCATGTCTTTGTTACTTATCGTCATGCTATTGGGGGCATAGTAGTGCTTCCTTTTGCTTATTTTCTTGAAAGGCTAGAGGCTATTGATGTTAAGAGCCCTCGCGGGCTGGCGAAAATCGTTGGAACTGTATTATCTTTGACTGGTGCTTTGATAATGATTTTGTATAAAGGACATACAATACAAAGCTTAAAGGGTGCCCCATTCCATCTTGGAGGCAAAATGGCTCATAATAACTGGATTAAAGGAACAATTTTGACTGTTGTGAGCTGCATATCATGGTCATTATGGTACATACTGCAGGCAATCATTGTGAAGAAATATCCTGCAAAACTGTCGCTAACAGCATGGATAAATTGCATTGGTGCAGCACAATCGGCTGTCTTTACAGTACTCGTGCAACGCAAACCTAGAGCATGGTTCTTAACATCAAGTGTTGAACTCTGCTGCATTTTATACGCGGGAGTTATATGTGGTGGTTTGCTTATCTACATTCAAATCTGGACCATGGCACAAAAAGGGCCAGTATTTGTGAGTATGTTTAATCCCCTTGGAACAATTTTGGTGTCTATGCTAGCATATTTTGTTTTGGGAGAACAACTTCACATTGGCAGTATACTGGGAGTGCTGATTGTTATCATGGGTCTTTACCTGCTAGTGTGGGGAAAAGAAGCGGATAGAGATTACAAGTCACAAGAGTCCTTTCCAGCACATGTTGAGGAGAAAGATTGCAAGACACAGATACAGACTTCAGTAACAGAGGAAGCATAA 903 0.4042 MTNNEQTFWVVYEKFKPHLFMVLVQVALVLQYFLVEASFNNGMDPHVFVTYRHAIGGIVVLPFAYFLERLEAIDVKSPRGLAKIVGTVLSLTGALIMILYKGHTIQSLKGAPFHLGGKMAHNNWIKGTILTVVSCISWSLWYILQAIIVKKYPAKLSLTAWINCIGAAQSAVFTVLVQRKPRAWFLTSSVELCCILYAGVICGGLLIYIQIWTMAQKGPVFVSMFNPLGTILVSMLAYFVLGEQLHIGSILGVLIVIMGLYLLVWGKEADRDYKSQESFPAHVEEKDCKTQIQTSVTEEA* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2420 300 SUPERFAMILY Multidrug resistance efflux transporter EmrE 193 268 - -
Mtr1g2420 300 PANTHER WAT1-RELATED PROTEIN 11 69 IPR030184 GO:0016021|GO:0022857
Mtr1g2420 300 PANTHER WAT1-RELATED PROTEIN 69 294 IPR030184 GO:0016021|GO:0022857
Mtr1g2420 300 PANTHER WAT1-RELATED PROTEIN 69 294 - -
Mtr1g2420 300 PANTHER WAT1-RELATED PROTEIN 11 69 - -
Mtr1g2420 300 Pfam EamA-like transporter family 126 264 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2420 Mtr-Chr1 34760639 34763334 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2420 2 297 Nodulin-like Gene Family AT1G75500 29.708 2.45e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2420 - - gmx:100808275 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2420 1 34760639 34763334 Mtr1g2420 1 34760639 34763334 ECH