Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2419 ATGAAAACTTCTTCAGAAACTCCTTCACAATCTTCACACAACACCAGATCCAAAAAACCCAATCTTCGTAGCTCAAAATCTTTATTCAAAGATCCAATTGAACTAACCACAAAAACCCCAGAAAAATCACTGGAGAAGCCACCACCGATGCGAACCCGCAATCGCGGTGTCGCACTTTCGATATCGGATATTAGAAAAGTTGCTAAGGGTCTTCAAGATCAGAAAAAACAAAGCAATGAAACGACATCGTTGAAGGGGAAATCTGCTAGAAGGCAAATCACATTGGCTTCTCCGCGGAAGAGCAGTGAATCATCCAATCTTCCTGAGAAGTATGAGAATTTGGGGGAGTTTTTCGATAGTTTGGATAGTTCGATTAGATTGTTGCGATTAAAAGGATCGATGACGTCGTTTAATAATATCAGGCCAAAGATTGAAACTTTAACTGATAGGAGGTTTACGCATGCTCATTTGGCTCAGTTGAAGTTTATCTTACCCGAAGCGATTGCTATTAAGAAGTTGTTGGTGTTTGATGAGCGAACTAGTTGTATGAAGCCGGATCTTCATGTTAGTATAAACCCTGATGCAGTAGAGTTTAATGCTAAGTTGTTGTCTGAATCTGGGACTATGTCTCTGAGGAAGTTGTTTCGTGTGCGGCTTAATGAGTTTTGGAAATCCCACCCAGAGGGTGATGAAGTTCCAGAGGAAATGCTGCCTGAGCCATTCAGTCGCCCAAAACAAGATCCTCTTGTACACATGATGAAACCTCCTTCATCATTCCCTGCAGTGAAACTATCTGTTGCACGTGCTTCTAGTGACATTGCGGATAATACAGACCCTGCTAACTCAGAAAGTCATGTGTCAGTTCCTGCTGAGACATCAGTTGAAGCTCTTAACCAGAAGCCGGCAGTTGCCTCTCATATGCCTCAATCTTTCAGAAGGCGGTTTTCTCAGAAATTAAAGGAAAATGTACAGCCACTTCAGTCTGATTCATTCCAACCCTCAGTTGTGCCAGTATCAGAGTCAAGCTTGAGAATAAATTCCACCTCTGAGGTCCCTAAAATATCCCCACCCGAGTTCGTTGTAGAATCATCCAGTAGTGAAGCACATCCTGCGATTCATGGTTCTTCAGACTGCTTCACACCATCCAGAGTTACACTAGCTACACCCGAGTTCGTTGTAGAATCATCCAGTAGTGAAGCACATCCTGCGATTCATGGTTCTTCAGACTGCTTCACACCATCCAGAGTTACACTAGCTACACCTAGCAAAACCATTGAGTATGCTGAAAGCAAAGATGGATCCTTCAAAACCGTTGATGCTATGTCAACTCCAGCTAAATTTGTATCTACTCCAGCCAGGCTGATGTCAGCTACACCTGCATTGAAGCCACCTAAAAGAAGTTTTATGACCCCAGATGACAACTCTACCAGCTCGCCGGACAAGTTGGTTAAGCGCCCACCTCGTTCAAGGTCATTGAAATTTGACACTCCTATGAAAAATGAAAATGATGCTGGCGGTTTGTCAATTGATGATGACATTTTTGATATCCTCCCGGATAATCTTCTCCATTCGATTCAGGAAAAAGAAAGAATAGCAATGGAGGAAAGGGATCCAGCTATCTCACAAGCTAAGAAGCGGAAGAAAATTATTGCCAGCCTCCCTAAGCTCTTTAACATGATTCACATGATGTTTCATTCAATAAACCGTTCTGTTATCACAAAAGAGGAGCTGATGAGCAAGATAATTTCAAGTCACCGTGATATTGTTGATAGAAGTGAAGTTGAAGAACAGTTGCATTTGTTGTTAGAATTAGTTCCTGAATGGATTTCTGAGAAGGCGGCCTCCAGTGGAGATATGCTAGTCTCCGTAAACAAAATGTTGAACCCTGAATCCTTAAGAGCATCACTTGAAGAAGCAAAATGA 1923 0.4228 MKTSSETPSQSSHNTRSKKPNLRSSKSLFKDPIELTTKTPEKSLEKPPPMRTRNRGVALSISDIRKVAKGLQDQKKQSNETTSLKGKSARRQITLASPRKSSESSNLPEKYENLGEFFDSLDSSIRLLRLKGSMTSFNNIRPKIETLTDRRFTHAHLAQLKFILPEAIAIKKLLVFDERTSCMKPDLHVSINPDAVEFNAKLLSESGTMSLRKLFRVRLNEFWKSHPEGDEVPEEMLPEPFSRPKQDPLVHMMKPPSSFPAVKLSVARASSDIADNTDPANSESHVSVPAETSVEALNQKPAVASHMPQSFRRRFSQKLKENVQPLQSDSFQPSVVPVSESSLRINSTSEVPKISPPEFVVESSSSEAHPAIHGSSDCFTPSRVTLATPEFVVESSSSEAHPAIHGSSDCFTPSRVTLATPSKTIEYAESKDGSFKTVDAMSTPAKFVSTPARLMSATPALKPPKRSFMTPDDNSTSSPDKLVKRPPRSRSLKFDTPMKNENDAGGLSIDDDIFDILPDNLLHSIQEKERIAMEERDPAISQAKKRKKIIASLPKLFNMIHMMFHSINRSVITKEELMSKIISSHRDIVDRSEVEEQLHLLLELVPEWISEKAASSGDMLVSVNKMLNPESLRASLEEAK* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2419 640 MobiDBLite consensus disorder prediction 483 497 - -
Mtr1g2419 640 CDD Cdt1_m 95 240 IPR014939 -
Mtr1g2419 640 MobiDBLite consensus disorder prediction 456 506 - -
Mtr1g2419 640 Gene3D - 511 640 IPR038090 -
Mtr1g2419 640 MobiDBLite consensus disorder prediction 35 49 - -
Mtr1g2419 640 CDD Cdt1_c 516 637 IPR032054 -
Mtr1g2419 640 PANTHER DNA REPLICATION FACTOR CDT1 33 640 IPR045173 GO:0003677|GO:0030174|GO:0071163
Mtr1g2419 640 SUPERFAMILY "Winged helix" DNA-binding domain 103 241 IPR036390 -
Mtr1g2419 640 SMART CDT1_2 107 239 IPR014939 -
Mtr1g2419 640 Pfam DNA replication factor CDT1 like 107 199 IPR014939 -
Mtr1g2419 640 MobiDBLite consensus disorder prediction 1 22 - -
Mtr1g2419 640 MobiDBLite consensus disorder prediction 74 108 - -
Mtr1g2419 640 MobiDBLite consensus disorder prediction 1 108 - -
Mtr1g2419 640 Pfam DNA replication factor Cdt1 C-terminal domain 520 613 IPR032054 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2419 442 638 Core DNA Replication Machinery Family AT2G31270 52.830 2.18e-57 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2419 K10727 - gmx:100778818 559.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2419 1 34756838 34760179 Mtr1g2419 1 34756838 34760179 ECH