Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2396 ATGGCAAGGGAGAATCTCAGGGTGCTAAGTGCACTAGATGTAGCAAGAACACAATGTTACCATTTTACAGCAATTGCCATTACTGGACTGGGCTTCTTCACCAATGCATATGATCTATTTTGCATATCGCTTGTTACAAGGCTACTCGGTCGTATATATTACTATGTCGACGGAGCTGAAGAGCCTGGAACATTGCCACCAAACGTTGCAGCAACAGTTAACGGCCTCGCTTTAGTTGGAACATTTACCGGACAACTCTTCTTCGGCTGGCTCGGTGACAAACTAGGCCGTAGAACAGTCTATGGAATCACTCTAAACATTATGATTATTTGTTCCCTAGGTTCTGGTCTTTCATTTGGACATGAACCAAAAATGGTGTTGGGAACTCTTTGCTTCTTCAGATTCTGGCTTGGTTTTGGTATTGGTGGTGATTATCCACTTTCTGCTACAATTATGTCTGAATACTCAAACAAAAAAACACGTGGGGCGTTTGTAGCTGCAGTTTTTGCTATGCAGGGTTTTGGAATTGTAGCAGGTGGTGTATTTGCTATCATAGTATCAGTTGCATTTAAATCGAAATTCGATGCACCGCCTTACGTGGTTGATCCTACGGGTTCAACTGTTCCGGAAGCCGATTATGTTTGGAGGATAATCTTAATGTTTGGAGCAATTCCAGCTGCATTGACTTATTATTCAAGATCTACAATGCCTGAAACCGCGCGTTACACCGCACTTGTTGCGAAGGATATGGATAAAGCTGTGGCAGATATGTCTAAGGTTTTGAAGATGGATATTAAAGCTGAACCTCTAAAAGATGATGATGTTGAAGAAAATAAACAATTTGGACTTTTTTCAAAGGAATTTATGTCGCGTCATGGTGTACATTTGCTTGGAACAATGTCCACATGGTTTTTCCTTGATGTTGTATTTCATAGTATGAATCTTTTCCAAAAAGATGTCTTTTGTACCGTTGGTTGGATTCGGTATCCGAAGACAATGAATGCAATGGAAGAGGTTTATATAATTGCGAAGGCGCAAACACTTATTGCTTTATGTAGTACAGTTCCTGGTTACTGGTTCACAGTGGCACTCATTGATAGAATGGGAAGGTTCACTATTCAGTTAATGGGATTCTTCTTTATGACAGTTTTTATGTTTGCAATTGCTATTCCTTTTGATCACTGGACAATAACAGAGAACAAAATTGGGTTTGCTGTGCTTTATGCCTTAACCTTCTTCTTCGCAAATTTCGGGCCTAATACTACCACATTTGTTGTGCCTGCCGAGATTTTCCCGGCTAGGTTTAGATCAACTTGTCATGGAATGTCGTCTGCAGCAGGGAAGCTTGGAGCGATGGTTGGCGCGTTCGGGTTTTTATTTTTAGTACAGAATCAAGATCCCAAGAAAACTGATGCAGGGTACCCTGCTGGTATTGGTGTGAGAAACTCATTGTTTTGTTTAGGTGCTGTTACCATTTTGGGATTCTGTTTTACTTTCTTGGTGCCTGAGGCAAAGGGAAGATCTCTTGAGGAAATGTCTGGTGAGGACATTGATGATATTGTTGATGATACTATTAGTCATAGCAGCAGTAGTAACAGAATGATGTCATATCCTTAG 1617 0.4075 MARENLRVLSALDVARTQCYHFTAIAITGLGFFTNAYDLFCISLVTRLLGRIYYYVDGAEEPGTLPPNVAATVNGLALVGTFTGQLFFGWLGDKLGRRTVYGITLNIMIICSLGSGLSFGHEPKMVLGTLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFVAAVFAMQGFGIVAGGVFAIIVSVAFKSKFDAPPYVVDPTGSTVPEADYVWRIILMFGAIPAALTYYSRSTMPETARYTALVAKDMDKAVADMSKVLKMDIKAEPLKDDDVEENKQFGLFSKEFMSRHGVHLLGTMSTWFFLDVVFHSMNLFQKDVFCTVGWIRYPKTMNAMEEVYIIAKAQTLIALCSTVPGYWFTVALIDRMGRFTIQLMGFFFMTVFMFAIAIPFDHWTITENKIGFAVLYALTFFFANFGPNTTTFVVPAEIFPARFRSTCHGMSSAAGKLGAMVGAFGFLFLVQNQDPKKTDAGYPAGIGVRNSLFCLGAVTILGFCFTFLVPEAKGRSLEEMSGEDIDDIVDDTISHSSSSNRMMSYP* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2396 538 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 506 IPR020846 GO:0022857
Mtr1g2396 538 TIGRFAM 2A0109: phosphate:H+ symporter 11 515 IPR004738 GO:0005315|GO:0006817|GO:0016021
Mtr1g2396 538 SUPERFAMILY MFS general substrate transporter 12 513 IPR036259 -
Mtr1g2396 538 CDD MFS_PhT 25 505 - -
Mtr1g2396 538 Gene3D MFS general substrate transporter like domains 20 527 IPR036259 -
Mtr1g2396 538 Pfam Sugar (and other) transporter 29 513 IPR005828 GO:0016021|GO:0022857|GO:0055085
Mtr1g2396 538 PANTHER HIGH AFFINITY INORGANIC PHOSPHATE TRANSPORTER 1 520 - -
Mtr1g2396 538 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2396 Mtr-Chr1 34540444 34542060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2396 1 514 Inorganic Solute Cotransporters AT2G38940 75.000 0.0 825
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2396 K08176 - gmx:100786638 853.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2396 1 34540444 34542060 Mtr1g2396 1 34540444 34542060 ECH