Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2391 ATGGTTTCCTTCACAACGTGGTGTCGCTACCTTCAATCCAAAGCTCAATACACCATCGATCTCGGCTACAAGAATCATAAAGGTGGTCATGTGAAAGATAATGAGCTAATGGATTTTATTTTCAAGCATTTCACTAATGGAAAGATGACCTTTTTGCATTGGACTAAAGGAGAGGAGATGGCCCCTACTATTGATGCCAAAGGAGCTACTCTTCTTGTTCGCAGATTACCGATTCCGGACCAAAAACGTGTTTATGTAGGAGATGTTGTGGTCTTGAAGAACCCTGAAAAGCCCGATGACTATCTAGTCAGAAGATTAGCTGCGACTGAAGGTTATGAAATGGCTTCTACTGATGAAAAGGACGAATCGTTTGTTCTTGAAAAGGATCAGTGTTGGGTAGTGGCTGAAAATGAGAAATTGAAAGCCAAGGAAGCAATTGACAGTCGAACATTTGGTCCAATTCACATGACCAACATCGTAGGCAGAGTCCTATACTGTCTGCGTAATGCTGTAGACCACGGCCGTGTTCAGAACAGTCCTTTCAGCATGCAAAAGGATTCACCAGTGTTGGAAATGGAACTTGATGTTGATGAGATGGTAAAAAGTCACAAAGCCTAA 618 0.4223 MVSFTTWCRYLQSKAQYTIDLGYKNHKGGHVKDNELMDFIFKHFTNGKMTFLHWTKGEEMAPTIDAKGATLLVRRLPIPDQKRVYVGDVVVLKNPEKPDDYLVRRLAATEGYEMASTDEKDESFVLEKDQCWVVAENEKLKAKEAIDSRTFGPIHMTNIVGRVLYCLRNAVDHGRVQNSPFSMQKDSPVLEMELDVDEMVKSHKA* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2391 205 PANTHER OSJNBA0068L06.9 PROTEIN 1 205 - -
Mtr1g2391 205 SUPERFAMILY LexA/Signal peptidase 53 175 IPR036286 -
Mtr1g2391 205 Gene3D Umud Fragment, subunit A 48 179 - -
Mtr1g2391 205 CDD S26_SPase_I 56 163 IPR019533 GO:0004252|GO:0006465
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2391 Mtr-Chr1 34499675 34503152 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2391 60 180 MADS-box Gene Family AT1G29960 30.159 1.11e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2391 - - gmx:100500100 309.301