Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2380 ATGGCAATAGAACAAAAACAACAAGAGAATGAAGATTCCTCCAACGGAATCAGAGTCCAAGGAATGCAATTCTCCTACAACGACATCCAACAACAACAACCACCGCTCTTCGTCGATTTCAACCTCCAAGTTTCTCCAGGATCCAGATGCCTCCTCGTCGGTGCTAACGGATCCGGTAAAACGACTTTGCTGAAGATTCTGGCGGGGAAGCATATGGTTGGAGGAAAAGACGTTGTCCGTGTCTTGAATTGTTCTGCTTTTCATGATACTCAGCTTGTTTGTAGTGGTGATCTTGCTTATTTGGGTGGATCTTGGAGCAAAAACGTTGGTTGCGCTGGAGACATTCCACTGCAGGGAGACTTCTCTGCTGAACATATGATATTCGGTGTCGAAGGCGTTGATCCTGAGAGGAGAGACAAGTTGATTGAGCTTCTTGATATAGATCTGCAGTGGCGAATGCATAAGGTATCCGATGGGCAGCGGCGTCGAGTGCAAATCTGTTTGGGTCTTCTTCATCCTTATAAGGTTCTCTTGCTGGATGAGGTAACAGTTGACCTGGATGTTGTTACTAGAATGGATTTATTGGAATTCTTCAAGGAAGAATGTGAGCAGAGAGAAGCTACAGTTGTATATGCAACTCACATTTTTGACGGACTGGAGACATGGGCAACTCATTTGGCATATATACAAGAAGGCGAATTGAGGAGAGCAGAAAAAATATCAGATGTTAATGAGTTGAAATCTTCAATTAATCTGCTGTCTGTTGTCGAGTCCTGGCTCCGTGCTGAAACAAAGCTTGAAAAGAAGAAACCTGTCCAGAATACATCTCATGCTCAAGGGAATTCTTTTACTAACTCTCCATTCTCTTCATCATCCAGACATATGGCATACTATCGATAG 900 0.4356 MAIEQKQQENEDSSNGIRVQGMQFSYNDIQQQQPPLFVDFNLQVSPGSRCLLVGANGSGKTTLLKILAGKHMVGGKDVVRVLNCSAFHDTQLVCSGDLAYLGGSWSKNVGCAGDIPLQGDFSAEHMIFGVEGVDPERRDKLIELLDIDLQWRMHKVSDGQRRRVQICLGLLHPYKVLLLDEVTVDLDVVTRMDLLEFFKEECEQREATVVYATHIFDGLETWATHLAYIQEGELRRAEKISDVNELKSSINLLSVVESWLRAETKLEKKKPVQNTSHAQGNSFTNSPFSSSSRHMAYYR* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2380 299 MobiDBLite consensus disorder prediction 270 299 - -
Mtr1g2380 299 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 248 IPR027417 -
Mtr1g2380 299 Pfam ABC transporter 39 183 IPR003439 GO:0005524
Mtr1g2380 299 Gene3D - 14 275 IPR027417 -
Mtr1g2380 299 PANTHER ABC TRANSPORTER I FAMILY MEMBER 21 11 299 - -
Mtr1g2380 299 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 17 256 IPR003439 GO:0005524
Mtr1g2380 299 SMART AAA_5 46 232 IPR003593 -
Mtr1g2380 299 PANTHER ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED 11 299 - -
Mtr1g2380 299 MobiDBLite consensus disorder prediction 273 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2380 Mtr-Chr1 34340803 34345058 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2380 17 210 Calmodulin-binding Proteins AT2G36910 24.057 5.02e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2380 K12608 - gmx:100788503 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2380 1 34340803 34345058 Mtr1g2380 1 34340803 34345058 ECH