Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2377 ATGGATCATGTGATTGGTGGAAAGTTTAAACTTGGAAGGAAAATTGGGAGTGGTTCTTTTGGAGAGCTTTATTTAGCTGTTAATATACAAACTGGAGAGGAGGTGGCTGTTAAGCTGGAATCTGTGAAGACCAGGCATCCACAGCTTCACTATGAGTCAAAACTGTATATGCTTCTTCAAGGAGGAACTGGAATTCCCCACCTCAAATGGTTTGGCGTTGAGGGAGAGTACAATGTCATGGTCATCGACCTTCTTGGACCCAGTCTGGAAGATTTATTCAATTATTGTAACCGGAAATTCACTTTGAAGTCGGTGTTGATGCTTGCTGATCAATTAATTAACAGAGTTGAATACATGCATTCAAGAGGCTTTCTTCACCGCGACATAAAGCCAGACAATTTTCTGATGGGCCTCGGACGTAAAGCAAATCAAGTGTATGCCATTGACTTCGGCCTTGCGAAAAAATATAGGGATCTTCAGACTCATAGGCACATACCGTACAGGGAAAATAAGAACCTTACAGGCACGGCACGCTATGCAAGTGTCAACACTCATCTTGGAATCGAACAAAGTCGAAGGGATGACCTGGAATCTCTTGGTTATGTGCTAATGTATTTCTTAAGAGGAAGTCTTCCCTGGCAAGGACTGAGGGCTGGAAACAAAAAGCAAAAATACGATAAAATCAGTGAGACGAAGGTATCAACTCCAATAGAGGTGCTCTGTAAATCATATCCCTCTGAGTTTGTATCATACTTCCACTATTGCCGTTCGTTGAGGTTTGAGGACAAACCAGATTATTCATATTTAAAGAGACTTTTCCGAGACCTTTTTATTCGAGAAGGCTATCAATTTGACTATGTTTTTGACTGGACTGTATTGAAGTATCCACAGAGTAGTGGCAGCTCTAGAGGACGGCATGGCAGTGGCAAGGCAGCTATGCATGCAGCTACACCTGTACATAAAGCACAAAAGATTCCAGTTGGGAGAGAGATTCGGGAGAAATTATCTGGTGCTGTTGTTGAAGCATTCACCCAGAGGAACCGCGCAAGTTCCAGCCCTCATCATGGTGAACACACCAGACATAGGACTTATGATGATGTGCACTATGCCCAACACAATTCAACTCGATATGGCAGCAGTTCAAGAAGAGCCATGGTATCATCAAAGCCAAATTCCTCAGGTGACCATACTGGCAGGATGGCCACAAGTGGGAGCCGCCCATCTGGCGCACATAGAGTTCAACCTGTGTATGATACGAAACAAGCAACTTTTGCGCGCAATGGGTCTATGAGAGGCCACCGTGATGATCCTTTGAGGAGTTTTGAGCTCCTCACTATCAGGAAGTAA 1347 0.4395 MDHVIGGKFKLGRKIGSGSFGELYLAVNIQTGEEVAVKLESVKTRHPQLHYESKLYMLLQGGTGIPHLKWFGVEGEYNVMVIDLLGPSLEDLFNYCNRKFTLKSVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYAIDFGLAKKYRDLQTHRHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLRAGNKKQKYDKISETKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTVLKYPQSSGSSRGRHGSGKAAMHAATPVHKAQKIPVGREIREKLSGAVVEAFTQRNRASSSPHHGEHTRHRTYDDVHYAQHNSTRYGSSSRRAMVSSKPNSSGDHTGRMATSGSRPSGAHRVQPVYDTKQATFARNGSMRGHRDDPLRSFELLTIRK* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2377 448 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Mtr1g2377 448 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2377 448 MobiDBLite consensus disorder prediction 299 323 - -
Mtr1g2377 448 Gene3D Transferase(Phosphotransferase) domain 1 1 333 - -
Mtr1g2377 448 PANTHER CASEIN KINASE I-LIKE 1 431 - -
Mtr1g2377 448 MobiDBLite consensus disorder prediction 351 369 - -
Mtr1g2377 448 MobiDBLite consensus disorder prediction 344 416 - -
Mtr1g2377 448 MobiDBLite consensus disorder prediction 370 409 - -
Mtr1g2377 448 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2377 448 PANTHER CASEIN KINASE-RELATED 1 431 - -
Mtr1g2377 448 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2377 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Mtr1g2377 448 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Mtr1g2377 448 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2377 Mtr-Chr1 34306784 34313422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2377 8 213 MAP Kinase Kinase Kinase AT3G06030 25.463 5.00e-13 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mtr1g2377 Pkinase 7.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2377 K08960 - gmx:100789031 802.357
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2377 1 34306784 34313422 Mtr1g2377 1 34306784 34313422 ECH
Mtr7g2916 7 45952999 45959392 Mtr1g2377 1 34306784 34313422 PCT