Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2365 ATGGATAATCCAAATGCTTTTGTGGATAGTGGTAGTATTCATGATGAAGGCATAGAAGTTGACAACTTTAATGTTGAAAATGAAGATGCATGGTGGGAGCCTAAAACAGATATGTGTTTTTCTAGCATAGATGATGTTAAATCATTTTATAGAGAATATGCTTTGAGAAAGGGTTTTGATTGGAAGATTAGAACATCGAGAAAAGGAAAGGATGGGGAGGTATGCTACTTAATTCTTGCATGCACAAGAGATCGGGCTGAAGTGACGAAAAGTGTATGTACATTGAAGACACGTCCGACAATGGGAAAAAGTTGTCCTGCTAAGATTTGTATCAAGTTGAAAGCAGATGGATTGTGGTACATTAACAAATTTGAGCCTAATCATTCTCATCATACTAGCCCTACAAAGGCAAGGTTGTTCAAGGCTAACAAGAATATGGACTTGCATGTAAAGAGGACAATTCAAATCAATGATGATGCAGGTGTGAGGATCAACAAGACTTTTCAATCTCTTGTTAAAGATGCAGGCGGGCATGAAAATGTACCATTTAATGAAAGAGATGTGAGGAATTATGTTAACAAGGAACGACGTGCAATTGGAAAAGAAGGTGATGGCAGAGGAACTAATGACAACAATTCTCAAAGAGTGACAAATCAGTTTGACAGCAACATCTACATTGAACCATATGTTGATGTTGTAAGTGGTGGAAATTTGCTAGATGCAAGTACAATGGTAGTTAACTAG 744 0.3723 MDNPNAFVDSGSIHDEGIEVDNFNVENEDAWWEPKTDMCFSSIDDVKSFYREYALRKGFDWKIRTSRKGKDGEVCYLILACTRDRAEVTKSVCTLKTRPTMGKSCPAKICIKLKADGLWYINKFEPNHSHHTSPTKARLFKANKNMDLHVKRTIQINDDAGVRINKTFQSLVKDAGGHENVPFNERDVRNYVNKERRAIGKEGDGRGTNDNNSQRVTNQFDSNIYIEPYVDVVSGGNLLDASTMVVN* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2365 247 Pfam FAR1 DNA-binding domain 48 132 IPR004330 -
Mtr1g2365 247 PANTHER OS03G0843700 PROTEIN 18 169 - -
Mtr1g2365 247 MobiDBLite consensus disorder prediction 197 216 - -
Mtr1g2365 247 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 18 169 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2365 Mtr-Chr1 34187500 34188683 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr1g2365 FAR1 2.2e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2365 - - cam:101513893 290.041