Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2362 ATGCAATCCTCAACTCCGCAACCTTCTCTTTCCTCTATGGCCTCAAAAGCCTTAACCACTGGTACTCACTCCCGAAATGGACGCCGTTTCTCAGTCTTTGATGACTCGGATGAGGAAAATGGAGACTGCAATATTCAACAGCAACGGAAACATGACGATTATGCTTTCTCTTTAGCTGGAAGTGTAGCTAGTAAGGATTTTGAAGAGCAGAAAGCATTCAACTATGATGAAGAGAAAGGGAAAGGAAAGCAAGAAAAGAGAAGTCTTATGAGCAATGACATAGAAGAAGATGACTACCTGCTGGCTGAGTCAAGGCAGCCATTATGGCGCAAAGTACCAATAGCTTCGAGCCTAATCAATCCATATCGCATAGTCATTGTCATGCGTCTTGTTGTCCTAGTTTTCTTCTTCCACTTTCGCATCACAACTCCGGTGCACGACGCATTTGCCTTATGGATAATCTCTGTGGTCTGCGAAATATGGCTCTCTTTGTCTTGGATAGTAGACCAGTTCCCCAAGTGGTTCCCCATGACACGCGAAACTTACTTGGAGCGCTTGTCCATGAGGTTTGAGCGCGAAGGAGAACCGAATCTTTTAGCCGCAGTCGATGTCTTTGTTACCACTGCAGACCCTTTGAAGGAACCACCTATTATAACAGCAAACACAGTTCTATCAATCTTATCTGTTGATTATCCTGTTGACAAAGTAAGCTGCTATGTATCAGATGACAGTGCATCTATGCTTCTCTTTGATACCTTGTCACAAACTTCTCAGTTTGCAAGAATATGGATTCCATTTTGTAAAAAGTATAGCATTGAGCCAAGGGCACCTGAGTCCTATTTTTCTCAGAAAGTTGATTACTTGAAAGACAAGGTACATCCAACATTTGTAAAGGATCGCAGGGCTATGAAGAGGGAGTATGAAGAATTCAAGGTGAGAATTAATGTACTGGTTGCAAAGTCTCAGAAAAAACCAGAAGAGGGGTGGGTTCTGCAAGATGGTACTCCATGGCCTGGGAACAACAGCGAAGATCATCCAGGAATGATTCAGGTGTGTCTGGGAAGTGCCGGTGCTCTGGACAATGAAGGTAATAATCTTCCACGGCTTGTGTATGTTTCACGCGAGAAATGTTCCGGCTATCAACACCATAACAAAGCTGGAGCCATGAATTCTCTGCTTCGAGTTTCTGCGGTGCTTAGCAATGCACCTTTTGTGTTGAATCTGGATTGTGATCAATACATCAATAATAGCAAGGCTCTTAGGGAGTCTATGTGCTTCCTAATGGACCCTCTACTTGGAAAGAAGACCGCTTATGTCCAATTTCCACGAAGGTTTGATGGCATTGACGATAATGATAGATATGCCAACCACAACACTGTATTCTTTGATATCAACATGAAATGCCTTGATGGAATTCAAGGTCCAGTGTATGTTGGTACTGGATGTGTGTTCAACAGGCAGGCATTATATGGCTATAAGCCACCATCTGACAAAAGACGAAAGACAAACTTCTCATGGTGTTGCTGTTGTTCTGGTGACTCTCGGTCAGCATTTGACATTGAAGAGATTGATGATGGACTTGAAGACTATGACGAGAAAGAGGAATCACCGATCATGTCTGTCAAAGTTTTTGAGAAAAAGTTCGGAGAGTCACCAGTTTTCATTGCTTCTGCATTGATGGAAGATGGTGGACTTCCGAAAGGAACTAATACTCGAATACTAATGAAGGAAGCCATTCATGTTATAAGTGTTGGCTATGAAGAGAAAACTGAATGGGGCAAAGAGATAGGGTGGCTTTATGGCTCTGTCACAGAAGACATCTTGACAGGGTTTAACATGCATTGTAGAGGATGGAAATCAGTGTACTGTATGCCAAAAAGAGCGGCTTTTAAAGGATCTGCACCTATAAACCTATCAGACAGATTACACCAAGTTCTGAAATGGGCTTTGGGTGCTACTCAGATTTTCTTTAGTGGTTATTGTCCATTGTGGTATGGCTACAGTGGAAAACTCAAATGGCTTCAAAGACTGGCTTACATGAATGCTATCGTTTATCCGTTCTCTTCTATCCCTCTTTTAGTGTACTGCACAATTCCAGCTATCTGTCTTCTGACTGGAAAGTTCATCCTCCCCACTCTGACAAGCCTTGCAAGCATTTGGTTAATGACTCTATTTATCTCCATCATTTTAACTTGTGTGCTCGAGCTTCGTTGGAGTAAGGTTAACATTCAAGACTGGTGGCGCAACGAGCAATTCTGGGTCATTGGAGGTGTTTCTGCACACCTTTTTGCAGTGTTTCAAGGCCTCCTTAAAGTTGCAGGACGCGACACTAGCTTCGCCGTGAGAACAAAATCAGCAGATGACACTGCATTCGGACAGCTCCATCTCTTCAAGTGGACCACTCTTCTCATTCCACCAACAAGTATTGTAATCTTGAACATGATTGGAATTGTGGCAGGAGTCTCTGAAGCCATTAACAGTGGCTATAACTCATGGGGACTTTTATTTGGGAAGGTTTTTTTCTCTTTGTGGGTCATTGTGCACTTGTACCCTTTCCTCAAAGGTCTACTGGGAAGGCAAAACAGAACTCCTATCATAGTAGTTCTCTGGGCAACACTTCTGGCTTTGATTTTCTCGATGATATGGGTGCGAATTGATATTTTCTTACCCAAGAAAACAGGCCCTGTACTCGCACAATGTGGGGTAGAATGCTGA 2715 0.4302 MQSSTPQPSLSSMASKALTTGTHSRNGRRFSVFDDSDEENGDCNIQQQRKHDDYAFSLAGSVASKDFEEQKAFNYDEEKGKGKQEKRSLMSNDIEEDDYLLAESRQPLWRKVPIASSLINPYRIVIVMRLVVLVFFFHFRITTPVHDAFALWIISVVCEIWLSLSWIVDQFPKWFPMTRETYLERLSMRFEREGEPNLLAAVDVFVTTADPLKEPPIITANTVLSILSVDYPVDKVSCYVSDDSASMLLFDTLSQTSQFARIWIPFCKKYSIEPRAPESYFSQKVDYLKDKVHPTFVKDRRAMKREYEEFKVRINVLVAKSQKKPEEGWVLQDGTPWPGNNSEDHPGMIQVCLGSAGALDNEGNNLPRLVYVSREKCSGYQHHNKAGAMNSLLRVSAVLSNAPFVLNLDCDQYINNSKALRESMCFLMDPLLGKKTAYVQFPRRFDGIDDNDRYANHNTVFFDINMKCLDGIQGPVYVGTGCVFNRQALYGYKPPSDKRRKTNFSWCCCCSGDSRSAFDIEEIDDGLEDYDEKEESPIMSVKVFEKKFGESPVFIASALMEDGGLPKGTNTRILMKEAIHVISVGYEEKTEWGKEIGWLYGSVTEDILTGFNMHCRGWKSVYCMPKRAAFKGSAPINLSDRLHQVLKWALGATQIFFSGYCPLWYGYSGKLKWLQRLAYMNAIVYPFSSIPLLVYCTIPAICLLTGKFILPTLTSLASIWLMTLFISIILTCVLELRWSKVNIQDWWRNEQFWVIGGVSAHLFAVFQGLLKVAGRDTSFAVRTKSADDTAFGQLHLFKWTTLLIPPTSIVILNMIGIVAGVSEAINSGYNSWGLLFGKVFFSLWVIVHLYPFLKGLLGRQNRTPIIVVLWATLLALIFSMIWVRIDIFLPKKTGPVLAQCGVEC* 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2362 904 SUPERFAMILY Nucleotide-diphospho-sugar transferases 357 709 IPR029044 -
Mtr1g2362 904 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 15 904 - -
Mtr1g2362 904 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 312 493 IPR029044 -
Mtr1g2362 904 Pfam Cellulose synthase 202 896 IPR005150 GO:0016020|GO:0016760|GO:0030244
Mtr1g2362 904 MobiDBLite consensus disorder prediction 1 48 - -
Mtr1g2362 904 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 15 904 - -
Mtr1g2362 904 MobiDBLite consensus disorder prediction 1 27 - -
Mtr1g2362 904 MobiDBLite consensus disorder prediction 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2362 Mtr-Chr1 34172553 34177307 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2362 100 904 Cell Wall Biosynthesis AT5G17420 68.473 0.0 1209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2362 K10999 - gmx:100777278 1488.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2362 1 34172553 34177307 Mtr1g2362 1 34172553 34177307 ECH