Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2359 ATGGCGCCAAGGCCCAATCCAAAAATAGCAGCGGCCCTCCAGGCAATGACAGCGTTTGGGATTCCTGAAGCAAAAGTGAAACGGGTGCTTAAGAAACTCCTAAAGTTGTTTGATAAAAACTGGCAACTTATCGAGGAAGAGAACTATAGAGCTTTATTGGATGCTATATTTGAAGAAGGCGATGATTTTGAGGAGCCAGAACCACAAAAGAAAAACAAGAGAGTAAATGAAGAAGAGACGGAGGCTGAGGAAGCTCCATTAAATGTTGAATCTGCTCGACCTTTGAAAAGATTGAGATTAAGAGGACAAGAGAACAGTTCCCCTAGCTCAGCTTCTTCCCCATTGAAGAAGTCTAACATAGAAAAGGCCACAGCACTTGAGGGCGGCTCTTCACAGCAGCCTCGAAACAACGTAGTGTCATCCGATGGAAATGGAAGGGTTGCAGCACGTCCCATGCGCGATGCTAGTTTTGACAGGGGAAAGCAACCTGCATCACCACATGCTTCTTATGAATTTACCGTACCTAAATCTGAGCCCGTTGACGAGGAAGATTATGAGCGGCGTCCCCTTGCAATGGTTCCCCCTGAACCATCAAGCTTAAGGCGCTATTCAAGGAAGAATGGTGTTACTGAAAAGCAAGGTGCCCATGTCTCCATGACACCATCACACCATAACACACATAAAGAAGTGGTTTCTGATGTTGTGATAGCCTCTTCAGCTCAGGGAGAAGTAAAACTTTCTCTTAGCTGCAGCTCAGCTCTTCAGGGACCAGATTTCCGCATGCCTACTCAAGAACAACTTCTAAAGATGATAGAGGATAAATGTCTGCGATCATATAAAATCATCGACCCAAATTTTTCTGTCGCAAAAATGTTGAGAGATGTATGTGATTGCATGTTGGAATTCAGTACTGATTCAAACGATAACTCACAAGAAGGTTCAATGCCAAAATCAAGCATAGATGTGTCAAAGGAATCGGAGGTTGATGGCACACCCGCCATTGGGGGCAGTAAGGATTTGGACACAGGTTCTCACTCATCAAATGGATCAATCCAAGTTAATTCTTTTTCTGCCTTGGTTTCACCTCGAGGCCCCTTTTCACCAGCCCATCAGAGCAGTTTGGATGATGCTGTACTGGTTTCCGAGATGAACAGGACAAATGATATTCCACAAAGTGATGTTAGAATGCAGCCGGAGGATCCCGTGTCTCCAAATTCACTCAGTTTAGTAGTTGTTCCACATCACCAATCTACAGAAGATCGTATAAGGTCTTATCATGATGTTAGTGACCTTACAAAAGGAGAAGAGAATAATCAAATTTCATGGGTGAATGAGTCATCTACTAACGACTTTCCACCACCTTTCAACTACATACCCCAAAACCTTGTGTTCCGAGATGCTTATGTTAACATTTCTCTATCTCGTATTGGGGCTGAAGACAGTTGTTCCTGTATAGGAAGTTGTGTCTTGTTGTCAGACACACATTGTGCCTGTACATGTAAAACTGGGGGTGAATTTGCATATACAGCTCAAGGCCTAATTAAGGAAGAATTTTTGGAACAGTGTATTGCTATCAGTCACAACCCTCAACAGCATTGCTTTTATTGCAAAGATTGTCCACTTGAAAGGTCAAAGAGTGATGGTTGTTTGGAACCATGTAAAGGACACTTGAAGAGAAAGTTTATTAAAGAATGTTGGAGCAAATGTGGCTGTGGGAAACAATGTGGAAATCGCGTTATTCAGCGAGGAATAACATACAACTTGCAGGTATTTTTCACATCCGAAGGAAAAGGATGGGGACTTCGTACCTTGGAGGAACTGCCAAAAGGAGCATTTGTGTGTGAGTTTGCTGGAGAAATTTTAACCATTAAAGAGTTGCATGAGAGGAACATTAAATGTGCTGAAAATGGGAAATCTACTTACCCAGTTCTACTGGATGCGGATTGGGATTCAACATTTGTGAAGGATGAAGAAGCTCTGTGCTTAGATGCAGCGTCCTTTGGCAACATTGCTAGATTTATCAATCACAGATGTTCTGATGCAAACTTGGTTGAAATCCCAATTCAAATTGAGTGTCCAGATCGTTACTACTATCATTTCGCCCTTTTTACCACCAGAAACATAGCATCACATGAAGAGCTCACTTGGGATTATGGCATTGACTTTGACGACCATGATCAACCTGTCAAACTGTTCCAGTGCAAATGTGGCAGTAAGTTCTGCAGGAATATGAAGCGATCAAACAGATCCACTAGGTCTGCGTTAATTGCTGGATGA 2277 0.4269 MAPRPNPKIAAALQAMTAFGIPEAKVKRVLKKLLKLFDKNWQLIEEENYRALLDAIFEEGDDFEEPEPQKKNKRVNEEETEAEEAPLNVESARPLKRLRLRGQENSSPSSASSPLKKSNIEKATALEGGSSQQPRNNVVSSDGNGRVAARPMRDASFDRGKQPASPHASYEFTVPKSEPVDEEDYERRPLAMVPPEPSSLRRYSRKNGVTEKQGAHVSMTPSHHNTHKEVVSDVVIASSAQGEVKLSLSCSSALQGPDFRMPTQEQLLKMIEDKCLRSYKIIDPNFSVAKMLRDVCDCMLEFSTDSNDNSQEGSMPKSSIDVSKESEVDGTPAIGGSKDLDTGSHSSNGSIQVNSFSALVSPRGPFSPAHQSSLDDAVLVSEMNRTNDIPQSDVRMQPEDPVSPNSLSLVVVPHHQSTEDRIRSYHDVSDLTKGEENNQISWVNESSTNDFPPPFNYIPQNLVFRDAYVNISLSRIGAEDSCSCIGSCVLLSDTHCACTCKTGGEFAYTAQGLIKEEFLEQCIAISHNPQQHCFYCKDCPLERSKSDGCLEPCKGHLKRKFIKECWSKCGCGKQCGNRVIQRGITYNLQVFFTSEGKGWGLRTLEELPKGAFVCEFAGEILTIKELHERNIKCAENGKSTYPVLLDADWDSTFVKDEEALCLDAASFGNIARFINHRCSDANLVEIPIQIECPDRYYYHFALFTTRNIASHEELTWDYGIDFDDHDQPVKLFQCKCGSKFCRNMKRSNRSTRSALIAG* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2359 758 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 753 - -
Mtr1g2359 758 Gene3D SET domain 431 744 IPR046341 -
Mtr1g2359 758 CDD SET_SETDB-like 453 719 - -
Mtr1g2359 758 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 758 IPR025776 -
Mtr1g2359 758 MobiDBLite consensus disorder prediction 59 203 - -
Mtr1g2359 758 MobiDBLite consensus disorder prediction 176 190 - -
Mtr1g2359 758 SMART preset_2 428 570 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mtr1g2359 758 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 753 - -
Mtr1g2359 758 SMART set_7 586 725 IPR001214 GO:0005515
Mtr1g2359 758 MobiDBLite consensus disorder prediction 64 81 - -
Mtr1g2359 758 ProSiteProfiles Pre-SET domain profile. 480 583 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mtr1g2359 758 Pfam Ubiquitin-binding WIYLD domain 8 61 IPR018848 GO:0018024
Mtr1g2359 758 Pfam Pre-SET motif 432 578 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mtr1g2359 758 MobiDBLite consensus disorder prediction 102 143 - -
Mtr1g2359 758 Pfam SET domain 598 719 IPR001214 GO:0005515
Mtr1g2359 758 MobiDBLite consensus disorder prediction 303 321 - -
Mtr1g2359 758 SUPERFAMILY SET domain 439 742 IPR046341 -
Mtr1g2359 758 MobiDBLite consensus disorder prediction 303 348 - -
Mtr1g2359 758 Gene3D - 1 62 IPR043017 -
Mtr1g2359 758 ProSiteProfiles SET domain profile. 586 719 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2359 Mtr-Chr1 34139616 34146061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2359 430 742 Su(var)3-9 homologs AT1G73100 31.118 3.73e-29 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mtr1g2359 Pre-SET 7.7e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2359 - - gmx:100778335 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2359 1 34139616 34146061 Mtr1g2359 1 34139616 34146061 ECH
Mtr1g2359 1 34139616 34146061 Mtr7g2941 7 46210741 46217514 PCT