Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2358 ATGGCGGGGGAAGAAGACAACAACAACAACACAGTTGCTTTCACAGGGGAGGAATCCATTCCTGATAATCAAGAAACCATAGCTGCTCCTGATGAAGCTTCTGTTGATGCTGCCGCTCCTCCGGCAAAGAAACGTGGCAGAAAGAGAAAAACGGAGAAGGAAGCCGAAACAGGCGAAATCGTGAGAAGAAGTGAGCGTGCCAAGAAGAGTAGCAGATCATTGAACGAGGATTACTTGTTAGATGTAGAGGAGGAGCTGGAAGTTAAGAAGATTAAGGGGAAACGTGGTAGGAAGAAGAAGGTGGCAACCGGTGTTGGTGTTACTGATGAAATCAATGCTGCTCAGGAGGGGGAGAATCCTGAATGCATTGAACAGCAACAGATGGGGATTGAAGATGGGTCCTTATTGGTCTGTAATAAGGACACTAATTGCCATCAATGTAAAAGAAATGACAAGGGCAGGGTTGTGAAATGCACGAAATGCGACCGGAAGAAATTTTGCATACTTTGTATTAACCGTTGGTATCCTCGCTTGAAAGAGGAGGACATTGCCAAGGCATGTCCAGGGTGCTGTGGTAATTGCAATTGCAAAGCATGCTTGCAATCACTTGCACTTATCAAGGCAATTAAAGATAAGCGAGAAACCTACAATGACCATGAGGTTGAGCTCTCCAAGTATATGTTGAAAATACTTCTTCCGTATTTAAGACAATTGGATGAAGAACAAATGGCCGAGAAGGAGATAGAAGCAAAGAGACAAGGGCTCTCATGTTCTGAGCTAAAAATAAAAGCCGCAGATATCCCTAAAAAAGAGCGTGTGTACTGTGACAACTGCAAAACGTCAATATTTGACTACCACAGAAGCTGTACAAAATGCTCTTTTGACATTTGTCTCCTTTGTTGCTGCGAGCTTCGTGGTGGGAAGCTTCTAGGTGGTGCAGATCCAATCAAGTTTGAGTTTATCTACCGAGGGCTTGATTATCTGCATGGTGGAAATGATAATGAAGAGAGAGTAAATGAAAGTGAACCTCGTGCTGCTGCCCAACCCGAGATTCGTGAATGGTCAAGATCTGGATGGCTTGCAGACAGTGATGGTAGCATTCCCTGTCCAAAAGCCGATGATGATTGTGATCATGGTTTCCTTGAACTGAGAAGCATACTTCCACAAAATTGCATCTCTGAGTTAGTATGTAAAGCAAAAGAACATGAAGAAACAATTAAGCTTCAAGATGCAGAGGAGACTTCTGATAGTAGGTGTTCTTGTTTGAAGCCTGTTTTGAATGCATCTGATATACACAATAGCACAAGGAAGGCAGCTTCTCGTGAAGATTCCAGTGAGAACTTCTTATACTGTCCCAGGGCAGTAAATCTATGTCATGAGGATTTAAGACATTTTCAATGGCACTGGAGCAAAGGGGAGCCTATAATTGTTAGCAATGTACTTGAATGTACATCTGGTTTAAGCTGGGAACCGTTTGTCATGTGGCGTGCATTCCGTCAGATAAGTAATACCAAGCAAAAAACTCTTTTGGATGTGAAAACTATTGATTGCTTAGGTTGGTGTGAGGGAGATATTAATTTGCACAAATTCTTTACTGGGTACACAAAGGGTCTCCTGGACTGGCTTAATTGGCCTAAGGTTTTGAAACTGAAAGATTGGCCTCCTTCTAATTTATTTGAGGAAAGTTTGCCCCGTCATTGTGCTGAGTTCATATCTTCCTTGCCGTTCAAAGAATATACAGATCCTTTCAATGGTGTTCTAAACCTTGCTGCGAAGTTGCCTAAAGATGTTTTACAGCCAGACATGGGCCCAAAAACATATATTGCTTATGGATTTGCTCAGGAGCTTGGGCGGGGTGATTCTGTGACTAAGCTCCATTGTGATATGTCAGATGCAAAAAAAAATCACCTTGAGCAAGACAAGAGGGAGCTAATTGGTGATAATCGGGATGGAGAGCCCAGCATTGACATGCTCGATAATACATCTTCTTCCATAAATGCTTCGTACGAGCAAAATAGTGTTCGATTTGTGGAAAATGGAAGTGGATTATGTGATGAAAAGGTGGTTGATCCAGAGCTCAAAGAAGTTGATAAAGAAAATAGTTTATTGGTTGGGTGCAATTCCTTAGATGGTGCTCTCTGGGATATTTTTCGGAGAGAGGATGTACCTAAATTGGAAGAATATTTAAAGAAGCATTTCAGAGAGTTCAGGCATGTCTATTGCTCTCCTTTAAAGCAGTTTGTGAAGAAAATGTTAGCCAAGTTGTTACCAAAAAGCAACAAATACAAGGCAGCTGGCAGCCGCAAAAATGTTGATTGCAAAGGGAATCTTTATTGGAGAATGGACACCTTGTGTTGCATACATCTAATGTTGGAAGAATACCACTTCATAAAGATGGCATTGCAAAGGGTTGTTCACCCCATCCATGATCAGACATTTTATTTGACTATCGAGCATAAAAAGAGGCTTAAGGAGGAGTATGGAATTGAACCCTGGACTTTCGTTCAGAAGCTGGGAGATGCTGTTTTCATTCCGGCTGGTTGTCCCCACCAAGTCCGAAATCTGAAGTCATGCACCAAGGTTGCCCTTGATTTTGTCTCTCCTGAAAATGTTGGCGAGTGCTTTCGTTTGACAGAGGAATTCCGCAAACTTCCAGTAAATCACAAGTCTGCAGAGGACAAATTGGAGGTGAAGAAAATGATTATATATGCTATGGTTGATTTGGTCAAGAAGTTGGAGAAAGCAAGGTCTGGAGAAACCAAGGTTCCAATGTAA 2775 0.4209 MAGEEDNNNNTVAFTGEESIPDNQETIAAPDEASVDAAAPPAKKRGRKRKTEKEAETGEIVRRSERAKKSSRSLNEDYLLDVEEELEVKKIKGKRGRKKKVATGVGVTDEINAAQEGENPECIEQQQMGIEDGSLLVCNKDTNCHQCKRNDKGRVVKCTKCDRKKFCILCINRWYPRLKEEDIAKACPGCCGNCNCKACLQSLALIKAIKDKRETYNDHEVELSKYMLKILLPYLRQLDEEQMAEKEIEAKRQGLSCSELKIKAADIPKKERVYCDNCKTSIFDYHRSCTKCSFDICLLCCCELRGGKLLGGADPIKFEFIYRGLDYLHGGNDNEERVNESEPRAAAQPEIREWSRSGWLADSDGSIPCPKADDDCDHGFLELRSILPQNCISELVCKAKEHEETIKLQDAEETSDSRCSCLKPVLNASDIHNSTRKAASREDSSENFLYCPRAVNLCHEDLRHFQWHWSKGEPIIVSNVLECTSGLSWEPFVMWRAFRQISNTKQKTLLDVKTIDCLGWCEGDINLHKFFTGYTKGLLDWLNWPKVLKLKDWPPSNLFEESLPRHCAEFISSLPFKEYTDPFNGVLNLAAKLPKDVLQPDMGPKTYIAYGFAQELGRGDSVTKLHCDMSDAKKNHLEQDKRELIGDNRDGEPSIDMLDNTSSSINASYEQNSVRFVENGSGLCDEKVVDPELKEVDKENSLLVGCNSLDGALWDIFRREDVPKLEEYLKKHFREFRHVYCSPLKQFVKKMLAKLLPKSNKYKAAGSRKNVDCKGNLYWRMDTLCCIHLMLEEYHFIKMALQRVVHPIHDQTFYLTIEHKKRLKEEYGIEPWTFVQKLGDAVFIPAGCPHQVRNLKSCTKVALDFVSPENVGECFRLTEEFRKLPVNHKSAEDKLEVKKMIIYAMVDLVKKLEKARSGETKVPM* 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2358 924 MobiDBLite consensus disorder prediction 1 68 - -
Mtr1g2358 924 ProSiteProfiles Zinc finger RING-type profile. 144 190 IPR001841 -
Mtr1g2358 924 MobiDBLite consensus disorder prediction 49 68 - -
Mtr1g2358 924 SMART cupin_9 563 882 IPR003347 -
Mtr1g2358 924 Pfam JmjC domain, hydroxylase 796 865 IPR003347 -
Mtr1g2358 924 MobiDBLite consensus disorder prediction 1 22 - -
Mtr1g2358 924 Gene3D Cupin 452 891 - -
Mtr1g2358 924 SUPERFAMILY Clavaminate synthase-like 452 907 - -
Mtr1g2358 924 ProSiteProfiles JmjC domain profile. 582 882 IPR003347 -
Mtr1g2358 924 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 43 915 IPR045109 GO:0032454|GO:0033169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2358 Mtr-Chr1 34115218 34125711 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mtr1g2358 JmjC 1.5e-13 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2358 K15601 - gmx:100797799 962.6