Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2349 ATGGAAGTTGTTGATGGGAATGGAGAACATTCTATTGATGGGAATGAAGAGCAAGCTGTCAAGGAGATTGGTGACAATGATTCATGTACCGTTGATTTAGAGGCTAACGGTGGTCAAGAACCTAACATTGGAATGGAATTTGATTCACAAGAAAATGCTTATTCGTTCTACACTCATTATGCTAAATCAGTTGGGTTTGGGATATCAATTAAAAATAGTCGTCGTTCAAAGATTTCTAGAGAGTTTATTGATGTAAGTTATGCTTGCACAAGATACGGCAAGAAGCGAGAATCCAGTTCACAAAATCCACGTCCTTGTTTGAAGGTGGGATGTGAGGCTAGTTTACGTGTTAAAAGAATTTGTGATGGAAAATGGATTGTTCATAGCTTCATTAAAGACCACAATCACGAACTTTTTCCAGCATATGCACATTATTTTCCTTGCCATAGAGGAATCAATAAAGCTCAAAAGCATTCTATTGAAACTTTGCACCATGTTGGAGTGAGAACAAGCAAAATTTTTGCCACAATGGCCAAAGAATATGGAGGATATGAAAACATTGGTTGCTTGGAGAAAGATGTAAGAAACCATTTAGATAAAGGTCGGCGTTTGGCTTTAGAATCTGGAGATGCAAATGCAATGTTAGATTGTTTTATGCTCATGCAAGAAGAAAGTCCAGGATTCTTTTATGCAATTGATATGGATGATGAGGGTCGCATGAAAAATGTATTTTGGGTGGATGCAAAAGGTAGAGAAGACTATCAAGAGTTTGGAGATGTGATTTCATTTGATACTACATATATCACAAATAAGTACAAAATGCCATTTGCTCCTTTTATTGGTGTAAACAATCACTTTCAATCAAGGTTACTTGGTTGTGCATTACTCTCAGATGAGACCAAGAACACTTTCATATGGTTGATGAAAATATGGCTTAGAGCAATGGGTGGAAAACCTCCAAATGCAATCATAACTGATCAAGATAGAGCAATGAAAGAGGCTATTAAAGAGGTATTTCCAAATTCTCGACATCGATTTTGTCTTTGGCATATACTTAGAAAGGTGCCTGAGAAGCTTAGTCATGTTTTAAGAGATGACGAAGACTTCATGAGATATCTCAACATATGCATATATAAGTCTTGGTCAAAACAACAATTTGAAGATAAATGGCATGAAATGGTGGAAAAATTTGATCTATTTGGAGATGATTGGATTCACTCTTTATATGAAGAACGTGAACATTGA 1245 0.3606 MEVVDGNGEHSIDGNEEQAVKEIGDNDSCTVDLEANGGQEPNIGMEFDSQENAYSFYTHYAKSVGFGISIKNSRRSKISREFIDVSYACTRYGKKRESSSQNPRPCLKVGCEASLRVKRICDGKWIVHSFIKDHNHELFPAYAHYFPCHRGINKAQKHSIETLHHVGVRTSKIFATMAKEYGGYENIGCLEKDVRNHLDKGRRLALESGDANAMLDCFMLMQEESPGFFYAIDMDDEGRMKNVFWVDAKGREDYQEFGDVISFDTTYITNKYKMPFAPFIGVNNHFQSRLLGCALLSDETKNTFIWLMKIWLRAMGGKPPNAIITDQDRAMKEAIKEVFPNSRHRFCLWHILRKVPEKLSHVLRDDEDFMRYLNICIYKSWSKQQFEDKWHEMVEKFDLFGDDWIHSLYEEREH* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2349 414 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 25 414 - -
Mtr1g2349 414 Pfam MULE transposase domain 260 353 IPR018289 -
Mtr1g2349 414 Pfam FAR1 DNA-binding domain 55 140 IPR004330 -
Mtr1g2349 414 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 25 414 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2349 Mtr-Chr1 34047305 34048549 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr1g2349 MULE 2.6e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2349 - - dzi:111309578 566.229