Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2347 ATGCAGCTCAAAACTCAGTCTTTCATCTTCTTCTTCTTCTGTTGCCTTTGTTGTGCTGGTGCAGCAGCAGATAATGAAGCATTTGCTTTACTTTCTATAAAAGCAGGTCTCATTGATCCATTGAATAGCCTACATGATTGGAAGGATGGAGGTGCAGCTCAAGCTCATTGTAACTGGACTGGTGTCCAGTGCAACTCAGCTGGAGCTGTAGAGAAGCTTAATCTCTCACACATGAATCTGAGTGGAAGTGTCTCAAATGAGATACAAAGTTTAAAAAGTCTAACTTTTTTAAACTTGTGCTGCAATGGATTTGAGTCATCACTTTCAAAACACATAACCAACCTCACCTCACTAAAGAGTCTCGATGTAAGCCAGAATTTCTTCACCGGCGGCTTTCCATTAGGCCTTGGAAAGGCATCGGAACTTCTTACCTTGAATGCATCAAGCAACAATTTCTCAGGTTTTCTTCCTGAGGACCTTGGAAATATCTCTTCCTTAGAGACACTTGATCTTAGAGGCAGCTTCTTTGAAGGGTCTATTCCAAAATCTATCAGTAATTTGAGTAATCTGAAGTACCTCGGTCTATCTGGGAATAATCTCACCGGGAAAATCCCGGCTGAGATTGGTAAACTTTCGTCGCTGGAGTATATGATCATCGGTTATAACGAATTTGAAGGTGGAATTCCGAAAGAGTTCGGAAATTTAACCAAGCTGAAGTATCTTGATTTAGCAGAAGGCAATGTTGGTGGTGAAATTCCTGATGAGTTGGGAAAACTCAAGTTATTGAACACAGTTTTCTTATACAAGAACAGTTTTGAAGGCAAGATTCCAACAAATATTGGAAACATGACTTCATTGGTGCTGCTTGATCTCTCAGACAACATGTTATCAGGAAATATTCCAGCTGAAATAAGTCAGCTAAAGAATTTGCAGCTTCTGAACTTTATGAGGAACAAGCTATCTGGTCCTGTACCTTCTGGCCTTGGAGATTTGCCTCAACTAGAGGTGCTTGAGCTATGGAACAATTCTTTGTCAGGGCCATTGCCTAGAGACCTCGGCAAGAATTCGCCGCTGCAGTGGTTGGATGTATCGTCCAATTCACTCTCCGGCGAGATTCCTGAAACTCTTTGCACTAAGGGAAATCTCACCAAGCTTATACTTTTCAACAATGCCTTCAAGGGTCCGATTCCAACAAGCCTATCCAAATGTCCTTCACTCGTTCGTGTTCGGATTCAAAACAATTTTTTTTCTGGTACAATTCCTGTTGGTTTTGGTAAGCTTGAGAAGCTTCAGAGGCTAGAATTGGCTAACAATAGTCTCACTGGTGGAATTCCTGAGGACATTGCTTCTTCCACATCTCTTTCGTTCATTGATTTCTCCAGAAACAACCTCCACTCTTCTCTTCCTTCCACCATTATTTCCATTTCAAATCTGCAGACGTTCATCGTCTCTGAAAACAACCTGGAAGGGGATATTCCAGATCAATTCCAAGACTGTCCCTCACTTGGAGTTTTGGATCTCTCATCAAACTTTTTCTCTGGAGTCATTCCAGAAAGCATTGCTTCGTGTCAGAAATTGGTAAAATTGAGCCTGCAAAACAACCTTTTGACGGGCGGCATTCCGAAAGCTATAGCAAGCATGCCTACATTGTCCATTCTTGATCTTGCTAATAACTCTCTAACTGGTCAAATACCTAATAACTTTGGTATGTCTCCAGCTCTGGAAACATTCAATGTCTCATACAACAAGTTAGAAGGTCCTGTCCCGGAAAATGGCATGCTGAGAGCAATAAATCCAAATGATCTTGTGGGAAATGCTGGCCTTTGCGGTGGTTTCTTCCCTCCGTGTGCGAAAACCTCAGCATATACAATGAGGCACGGAAGCTCACACACAAAGCACATTATTGTAGGATGGATAATTGGAATATCATCCATCTTAGCCATTGGAGTTGCTGCTTTGGTAGCAAGATCCATATACATGAAGTGGTACACTGAAGGATTGTGCTTCCGAGGAAGATTTTATGGAGGTCGCAAGGGATGGCCTTGGAGATTGATGGCATTTCAGAGACTCGATTTTACAAGTACTGATATCTTATCCTGCATCAAGGAAACAAATGTGATAGGCATGGGAGGGACCGGCGTTGTTTATAAGGCTGAGATAGCGCAATCAAGTACAGTTGTGGCAGTCAAAAAATTATGGAGAACAGAATCTGATATCGAAGTAGGAAGTGGTGATGATCTTGTTGGAGAGGTGAATCTTTTAGGGAGGCTAAGGCATAGGAACATTGTTAGACTACTAGGGTTTCTTTATAATGACACTGATGTGATGATAGTTTATGAATTTATGGTCAATGGAAACCTTGGAGATGCCATGCATGGTAAACAATCAGAGAGATTGCTTGTAGACTGGGTTTCGCGGTATAACATAGCTCTAGGAATCGCACAAGGACTCGCTTATCTTCATCATGACTGTCATCCACCTGTTATCCATCGAGATATCAAGTCGAATAATATACTTCTTGACGCAAATCTTGAGGCAAGGATAGCAGATTTCGGATTAGCCAAGATGATGGTTCGGAAGAATGAAACAGTCTCCATGATTGCCGGATCCTATGGATACATTGCCCCTGAATATGGATACTCCTTGAAGGTAGATGAAAAGATTGACATTTACAGCTTTGGAATAGTTCTTTTGGAGCTTATTACAGGAAAGCGGCCTATAGATCCGGACTTTGGAGAGTCTGTAGACATTGTAGGGTGGATTAGAAGGAAGATAGACAAAAATTCTCCAGAAGAGGCGTTAGATCCAAGTGTAGGAAACTGTAAGCATGTTCAAGAAGAGATGCTTTTAGTTCTCAGAATAGCACTTCTTTGCACTGCTAAGCTACCTAAGGAAAGACCCTCCATGAGGGATGTTATAATGATGCTAGGAGAGGCAAAACCAAGGAGAAAAGGTGGCAAGAAAAATGAAACATTAACTGCTAACAAAGAGAATGTAACTAGCACATCACCAGTTAATGGCCTTCTTTAG 3030 0.4162 MQLKTQSFIFFFFCCLCCAGAAADNEAFALLSIKAGLIDPLNSLHDWKDGGAAQAHCNWTGVQCNSAGAVEKLNLSHMNLSGSVSNEIQSLKSLTFLNLCCNGFESSLSKHITNLTSLKSLDVSQNFFTGGFPLGLGKASELLTLNASSNNFSGFLPEDLGNISSLETLDLRGSFFEGSIPKSISNLSNLKYLGLSGNNLTGKIPAEIGKLSSLEYMIIGYNEFEGGIPKEFGNLTKLKYLDLAEGNVGGEIPDELGKLKLLNTVFLYKNSFEGKIPTNIGNMTSLVLLDLSDNMLSGNIPAEISQLKNLQLLNFMRNKLSGPVPSGLGDLPQLEVLELWNNSLSGPLPRDLGKNSPLQWLDVSSNSLSGEIPETLCTKGNLTKLILFNNAFKGPIPTSLSKCPSLVRVRIQNNFFSGTIPVGFGKLEKLQRLELANNSLTGGIPEDIASSTSLSFIDFSRNNLHSSLPSTIISISNLQTFIVSENNLEGDIPDQFQDCPSLGVLDLSSNFFSGVIPESIASCQKLVKLSLQNNLLTGGIPKAIASMPTLSILDLANNSLTGQIPNNFGMSPALETFNVSYNKLEGPVPENGMLRAINPNDLVGNAGLCGGFFPPCAKTSAYTMRHGSSHTKHIIVGWIIGISSILAIGVAALVARSIYMKWYTEGLCFRGRFYGGRKGWPWRLMAFQRLDFTSTDILSCIKETNVIGMGGTGVVYKAEIAQSSTVVAVKKLWRTESDIEVGSGDDLVGEVNLLGRLRHRNIVRLLGFLYNDTDVMIVYEFMVNGNLGDAMHGKQSERLLVDWVSRYNIALGIAQGLAYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLAKMMVRKNETVSMIAGSYGYIAPEYGYSLKVDEKIDIYSFGIVLLELITGKRPIDPDFGESVDIVGWIRRKIDKNSPEEALDPSVGNCKHVQEEMLLVLRIALLCTAKLPKERPSMRDVIMMLGEAKPRRKGGKKNETLTANKENVTSTSPVNGLL* 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2347 1009 Pfam Leucine rich repeat N-terminal domain 23 65 IPR013210 -
Mtr1g2347 1009 SMART serkin_6 701 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2347 1009 Gene3D Ribonuclease Inhibitor 346 620 IPR032675 -
Mtr1g2347 1009 MobiDBLite consensus disorder prediction 979 1009 - -
Mtr1g2347 1009 Gene3D Phosphorylase Kinase; domain 1 701 785 - -
Mtr1g2347 1009 Pfam Leucine rich repeat 476 536 IPR001611 GO:0005515
Mtr1g2347 1009 Pfam Leucine rich repeat 165 223 IPR001611 GO:0005515
Mtr1g2347 1009 Pfam Leucine rich repeat 404 464 IPR001611 GO:0005515
Mtr1g2347 1009 ProSiteProfiles Protein kinase domain profile. 701 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2347 1009 SMART LRR_typ_2 283 307 IPR003591 -
Mtr1g2347 1009 SMART LRR_typ_2 331 355 IPR003591 -
Mtr1g2347 1009 SMART LRR_typ_2 427 451 IPR003591 -
Mtr1g2347 1009 SMART LRR_typ_2 187 211 IPR003591 -
Mtr1g2347 1009 SMART LRR_typ_2 547 570 IPR003591 -
Mtr1g2347 1009 MobiDBLite consensus disorder prediction 992 1009 - -
Mtr1g2347 1009 ProSitePatterns Protein kinases ATP-binding region signature. 707 731 IPR017441 GO:0005524
Mtr1g2347 1009 Pfam Protein kinase domain 703 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2347 1009 ProSitePatterns Serine/Threonine protein kinases active-site signature. 828 840 IPR008271 GO:0004672|GO:0006468
Mtr1g2347 1009 Gene3D Ribonuclease Inhibitor 25 139 IPR032675 -
Mtr1g2347 1009 Gene3D Ribonuclease Inhibitor 140 207 IPR032675 -
Mtr1g2347 1009 Gene3D Transferase(Phosphotransferase) domain 1 786 1002 - -
Mtr1g2347 1009 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 8 992 - -
Mtr1g2347 1009 SUPERFAMILY Protein kinase-like (PK-like) 694 976 IPR011009 -
Mtr1g2347 1009 SUPERFAMILY RNI-like 252 591 - -
Mtr1g2347 1009 Gene3D Ribonuclease Inhibitor 208 345 IPR032675 -
Mtr1g2347 1009 SUPERFAMILY L domain-like 56 349 - -
Mtr1g2347 1009 PANTHER UNNAMED PRODUCT 8 992 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2347 Mtr-Chr1 34019131 34022842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2347 8 1009 Receptor kinase-like Gene Family AT1G08590 60.411 0.0 1171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr1g2347 Pkinase 9.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2347 - - gmx:100788430 1690.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2347 1 34019131 34022842 Mtr1g2347 1 34019131 34022842 ECH