Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2319 ATGTCCAAAGAAAAAAACTCCAAGCATAGTCCATCTAATGTAGTTGCTAAATTAATGGGGCTTGAAACCCTTTCAAAAGGAGAGCCGAATTTATCGGTGATTAGAAGCCAAACAAAAGATTATTATCAAGACATGTATGGTCATTTAGGGTGGCCATTGAAACATTGGAAAGTGGAAGATAGGTTTATGATGGATAAGGGAATGCTTCATGAATTTCATCATCCAAGCACAGAACAAGTTGATTACAAAGATGGATATGAAACATGGATGCAATCTCAGAGAGGAAGGTGGAGGGAAGATGTTGATGAGGGGAAGATGGCTCTCGTTCGTCAGAAATTCATTGAAGCAAAATATCTGTCAACAGATGAGACGCTGCGCCAATCGAAGCAATTTGAAGATGCATTGGATATTTTAAGCTCAAACAATGAACTCTTGGTCAGGTTTCTAGATTCACAAAATATTTATCAAATTCCCTCTACTCCACAGGATGATGCAAATCACATTACTCTTATCAAACCTTTGAAGATGTTTGGCAATGACAAGTCTTCTGGAAAGGGTAAGAAGAAGGATAGGTTGATTAAGAAACCAGAAAATTATGATCAAGCAGCTGTATGGGAGAACAGGAATTATGGATACTCTCCGGAATCTACTCGAATAGTGGTATTGAAGCCTAGTCCTGGGAGAACAAATGATCTTAAGGCTTTGGTTTCTCCAACAAATCCATCGCCTCAAAGTTTCTATCAGGGAAATGGAGATGCTAATGTACTTGAATCCATAGAAGTAGCAAAAGAGATTACACTCCAAATGCATGAAGGCCTAAGAAGCTACCAAAAGAATAAAATTTTACATTCTTCGGTATTTTCCAGTGGCTATTCCAGTGATGAGAACTCATTTGACAAATCATATCATGATTTGGAAGCCATGTCACCAATGCCAAGGCATTCTTGGGATTGCATCCATGTATGTGGCAGTCCTTATTCTACACAATCTTTAGGACGTACAACGTGTTCTCCCGAGTCCTCGGTGTGCATAGAGGCAAAGAAACGACTTTCTGAAAGATGGAACGTCATGGCATCTAACGGAAAAGGCCATCAAGAACAAAGGCATGTGTCGAGAAACTCTACTTTGGGTGAAATGCTTTCTCTTTCCCTTGTAAAGAAATCTGCAACATCTGTGATTGAGAGTACTAATAAACACCAAGAAGAAGAAAGAAAATCTGTTTCTTGCACTGAATCTTTCAATGAAAAAATTAGCATTAATGATTCTCCTCAAAACGATTGTGGGTTGAATCCTGACCCTGCATCTTCAACAGTCTATGAACCTAGCCTCGGCATTGATGCCGTTGACAAAGAACATGGCTCCAAGGTGGTGGCAAAGTCCAAGAGTAAGAAATCATCATTTAAAGGGAAAGTTGCAAGTTTCTTATTTTCAATGAGTAAAAAGTCAACCAAGAAAAAATCTAGTTCATCTCATTCGAATGATGAATCTGAAACTATTGTCAACGAAACATCAGTTCCATCAGTAAATTCATCTGGATTCCTCGGAGATAATGTGTCTCAAAGCTTCAATGTTGGTGGATTTGAAGAGTCTCTTGCAGCTTTATGTGAATCAGTCTCTAGTGAACCACAAGAAGACATGATTACACTAGAGCCTGGATTGAATGAGTCAAAGCCCTTGGTGCCAGAGATTCCAAATGAAAAACAAGATCGGCCTAGTCCAATCTCAGTGTTAGAATCTCCATTTGAAGAATACAATACACCTCATGAGTCCTTGGAAAGCACGAAAGATGGTCACATGGGATCACTGGTGCCGATGAAGTCCAATTTAATCGACAAATCACCACATATAGAATCAGTGGCTAGGACCCTATCATGGGATGAAGATTCTTGTGGAGAGTTAGCAAGTCCATATTATCCATTAAAAAGGGCTTGTTCCTTAGACACCAAGTTAGAGGATCATGAATGGCTTATCTTAGTCCAAAAACTACTATCAGCATCTGGACTTGATGATGATCAACAACAGTATGACTCATTTCACACAAGATGGTATTCCCTTGAAAGCCCATTGGACCCATCATTGAGGGACACATATGTCAACATAAATGAAAACAAGGACAGTACTCAGCCTCTTAATGAGGCCAAGAGAAGGAAAATGAGGTCAAATCAGAAACTTGTATTTGATTGTGTTAATGCTGCACTATTGGAAGTTGTTGGCTATGATGGATCAGAGAATTACTTCAAGATGTGCAGTGGGACCCACAGAAGGCCCTTCTTTGTTCAAGAGGGTTCATGTTTGATGGACCACATTGTGGCCCAAATGAATGAATTAATAGCAAATGGGATGAAGTTTGTTTGGGGTGGGGACAGTCACAGCTTGGTTGTAGAAAATGTTGTTAGGAAAGAGGTTGTGGAGAGTGGGTTGGTTGAGGTTATGAGAATGGAGATTGATGCTTTGGGGAGGGAAATAGAAGGAAAGATTATAGAAGAACTCGTCGAGAATCTTGTGCTCGATTTTACAGGCAGATGA 2526 0.3975 MSKEKNSKHSPSNVVAKLMGLETLSKGEPNLSVIRSQTKDYYQDMYGHLGWPLKHWKVEDRFMMDKGMLHEFHHPSTEQVDYKDGYETWMQSQRGRWREDVDEGKMALVRQKFIEAKYLSTDETLRQSKQFEDALDILSSNNELLVRFLDSQNIYQIPSTPQDDANHITLIKPLKMFGNDKSSGKGKKKDRLIKKPENYDQAAVWENRNYGYSPESTRIVVLKPSPGRTNDLKALVSPTNPSPQSFYQGNGDANVLESIEVAKEITLQMHEGLRSYQKNKILHSSVFSSGYSSDENSFDKSYHDLEAMSPMPRHSWDCIHVCGSPYSTQSLGRTTCSPESSVCIEAKKRLSERWNVMASNGKGHQEQRHVSRNSTLGEMLSLSLVKKSATSVIESTNKHQEEERKSVSCTESFNEKISINDSPQNDCGLNPDPASSTVYEPSLGIDAVDKEHGSKVVAKSKSKKSSFKGKVASFLFSMSKKSTKKKSSSSHSNDESETIVNETSVPSVNSSGFLGDNVSQSFNVGGFEESLAALCESVSSEPQEDMITLEPGLNESKPLVPEIPNEKQDRPSPISVLESPFEEYNTPHESLESTKDGHMGSLVPMKSNLIDKSPHIESVARTLSWDEDSCGELASPYYPLKRACSLDTKLEDHEWLILVQKLLSASGLDDDQQQYDSFHTRWYSLESPLDPSLRDTYVNINENKDSTQPLNEAKRRKMRSNQKLVFDCVNAALLEVVGYDGSENYFKMCSGTHRRPFFVQEGSCLMDHIVAQMNELIANGMKFVWGGDSHSLVVENVVRKEVVESGLVEVMRMEIDALGREIEGKIIEELVENLVLDFTGR* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2319 841 MobiDBLite consensus disorder prediction 493 507 - -
Mtr1g2319 841 Pfam Protein of unknown function (DUF3741) 110 153 IPR022212 -
Mtr1g2319 841 PANTHER DUF3741 FAMILY PROTEIN 1 841 - -
Mtr1g2319 841 Pfam Domain of unknown function (DUF4378) 659 832 IPR025486 -
Mtr1g2319 841 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 841 - -
Mtr1g2319 841 MobiDBLite consensus disorder prediction 483 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2319 Mtr-Chr1 33707541 33712217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2319 1 839 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 34.744 1.18e-121 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2319 - - mtr:MTR_1g069190 1628.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2319 1 33707541 33712217 Mtr1g2319 1 33707541 33712217 ECH
Mtr7g2986 7 46711375 46716919 Mtr1g2319 1 33707541 33712217 PCT