Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2304 ATGGCTGATTTCACTCCCAATTCTTCTAATTGCACCCCCACAACTTCTTCTTCTTCTACTTCTTCTTCTTCTTGCTTCCAACGAACGGTTACATTGTACGATTGGTGGCTCGTTAAATCATCCCAAGGAAACAACCACCGTTTAGCCATCTCCGGCATCTCTTCCACAAAGGAAGAAGCCGTTCGGGTGTTTAATTCCGCTCCTATTATCAAAAGATATGATGAGGTTTCCCTTGAGACTGTCGATGCTCTATATGTTTTGATTAGGGGTTTCATCAATAAACAGCGCACACTGGATAATGGTTTTACTCCTCAGATTTTCAAGAGTTTTTTATTTGGCTTTCCTCAAAACTGGGAAAGCTCTTTTCTATCTTGCGTTAGAGAAGAATCAGAAACCGGTACTGATTCGGGCAATGCTGTTTTGGATAATGAATTTGCATTTTATCAAGGAACTTTCTCTGTCGGTGAGGAAAAGTCCATTCCTACTTCGTCGGTATTGCTTGAAGAGGCCCCAGAGAATTGCAAGACTCCATTCCCCGGAGATGAATGCAAAGTCTCAAAGAAGATGACTGGGGTTGATATTGCTTGTAGTAGTGGTAAAAATAGACGTAGTACCAGGTTGCATAATATTAAAGTCTGTCAGCAGAAGAAGCCGAAGCAGCATCCTGAGTCTAGAGGCCCTTTCAAGCATCCAGATGGAGAGCCGAGCTCTACCACAATGGCCGTGGAAAATCATGATTCGGATAGTGTTGTTCCGGATGATGTACCAGCAAATCTTCCAGAAATATCATTTGATGCTTTGGAAAATTCTGTTCCTACCTCTTTGGTCACGACAGATTGCAATATGTCGTTCCTTGAAGATGAACAAGATATGTCAATTAAGATGAGTGAGGTCAACAATGTTCATGGTAGTGGCCGGTTGCATAATACTAAGGACTGCCAGAAGAAGCAGCCTGCGTCTGGAGATCCTCTCAAGAATCCAGAGAAAGAGCAGAGCTCTACCTTGAAGGTTGTGGAAAATCATGATTTGGATACTGCTGTTCCTGATAATGTATCAACAAATCTTCCCGAAATATTATCCGATGCTGTGGAGAAGTCTTTTCCTACTTCTTTGGTATCACTGGATAAGACCACGGGAGATCGCAATAAGGCATTCCTCGAAGATGAACGGGATATGTCAATTAAGACGGGTAGGGTCAATGTTGTTCATGGTAGTGGCGGGAATAAACGTAGTGCCCGGATGCATAATGTTAAACCCTACCAGAAGAAGCAACCTGCTACTGGAGATCCTGCAACACATCCAGATAAAGACCAGATCTCTGCCTCAGCAGTCTTGAAAATGAGTGATGGAGGACTGGAAAGTCTATCGACACCCGTTCAATCACAAAAGGGAAGAGTAAACACAATGTCTGGGCAGGTCACTAATAAATTGAGTTCCAGAATTTCCAAATCCTTTTCAGCAAAAACCCAAGGACGTTGTAAGAAAAAAAGGGCGACAATTGAAACAGAAGTGGTCACACCTAAGAGAAAAATTATTAAACATGCATCTTCTGTAAAATCTCCTCAAGGAAGGAATGTAAGTCACTCGAACAAGGGAAGTCAACAGAGATTATCCACAGTTTCTCCAGAGTCATTGAGTCTCAAAAAATCCAGATCTGGAAGGTGGCTTCTACCTCCCTTAGAGTTTTGGCGCAATCAACAACCTATTTATAATATGGACCGTGAGATTACAGAAATTCAGGAAGGTTCATCTTTGATATCACCTTTTAGAGGCTCTTCATCATTGGGCAGGTGA 1794 0.4231 MADFTPNSSNCTPTTSSSSTSSSSCFQRTVTLYDWWLVKSSQGNNHRLAISGISSTKEEAVRVFNSAPIIKRYDEVSLETVDALYVLIRGFINKQRTLDNGFTPQIFKSFLFGFPQNWESSFLSCVREESETGTDSGNAVLDNEFAFYQGTFSVGEEKSIPTSSVLLEEAPENCKTPFPGDECKVSKKMTGVDIACSSGKNRRSTRLHNIKVCQQKKPKQHPESRGPFKHPDGEPSSTTMAVENHDSDSVVPDDVPANLPEISFDALENSVPTSLVTTDCNMSFLEDEQDMSIKMSEVNNVHGSGRLHNTKDCQKKQPASGDPLKNPEKEQSSTLKVVENHDLDTAVPDNVSTNLPEILSDAVEKSFPTSLVSLDKTTGDRNKAFLEDERDMSIKTGRVNVVHGSGGNKRSARMHNVKPYQKKQPATGDPATHPDKDQISASAVLKMSDGGLESLSTPVQSQKGRVNTMSGQVTNKLSSRISKSFSAKTQGRCKKKRATIETEVVTPKRKIIKHASSVKSPQGRNVSHSNKGSQQRLSTVSPESLSLKKSRSGRWLLPPLEFWRNQQPIYNMDREITEIQEGSSLISPFRGSSSLGR* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2304 597 MobiDBLite consensus disorder prediction 518 545 - -
Mtr1g2304 597 MobiDBLite consensus disorder prediction 302 352 - -
Mtr1g2304 597 MobiDBLite consensus disorder prediction 216 230 - -
Mtr1g2304 597 PANTHER MIS18-BINDING PROTEIN 1 7 590 - -
Mtr1g2304 597 MobiDBLite consensus disorder prediction 213 256 - -
Mtr1g2304 597 MobiDBLite consensus disorder prediction 511 545 - -
Mtr1g2304 597 Pfam SANTA (SANT Associated) 30 120 IPR015216 -
Mtr1g2304 597 MobiDBLite consensus disorder prediction 1 23 - -
Mtr1g2304 597 MobiDBLite consensus disorder prediction 400 436 - -
Mtr1g2304 597 PANTHER MIS18-BINDING PROTEIN 1 7 590 IPR039110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2304 Mtr-Chr1 33520791 33527366 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mtr1g2304 SANTA 6.3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2304 - - mtr:MTR_1g069020 1151.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2304 1 33520791 33527366 Mtr1g2304 1 33520791 33527366 ECH