Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2303 ATGGTTGATTCCACTCCTCCAACTTCAACTATTTCTTCTAATGGCACCGCCACTTCTTCTTGTTTCCGACGAACGGTTACTTTATACGATTGGTGGCTCGTTAAATCATCCCAAGGAAACAACCACCGTTTAGCCATCTCTGGCATCTCATCCAGAAAGGAAGAAGCAGTTCAGTTTTTTGTTTCCGCTCCTATTATCAAAAGATATGATGTGTTTTCCCTTGAGACTGCCGATGGTATATATGTTATCACTAGGGGTTTCATGAACGAGCAGCGCACGCTGGAAAATGGTTTTACTCCTCAGATTTCAAAGATTTTTTTATATGGTTTTCCTCCAAACTGGGAAAGCTATGCTCTAGAATGCATCGGAGAAGGATCTGAAGCTGATATTGATTCGGCCAATGCTATTCCGGATAATGTATCTGCAATTTGTCAAGAAATCTTGTCTGATGGTGAGGAAAATTTCAGTCCTACTTCGTTGGTGTTGCCTGACGAGGCCCTGGGAAAATGCAAGAAACCATTCGCTACAAAAGAATGCAAAGCCTCAAAGGAGATGAGTGGGATTGATGTTACTTATGGTAGTGGCGAAAATAGACATAGTACCAGGTTACGTAATATTAATGTTTTTCAGCGGAAGCAGCAACCTGCATATAGAGGTCCTCGCAAGCATCCAAATAAAAAACAGATCTCTACCTCAACAGAAGTGGAAACTTGTGATTCAGACACTGCTATTTCTGAAAATGTATCAGCAAATCTTCCAGAAATACCATCAGATGCTGTGGAGAAGTCTTTTCCTACTTCTTTGGTATCACCGGATAAGACCATAGGAGATTGCAATAAGGCATTCCTCGAAGATGAACGGGACATGTCAATTAAGAAGTGTGAGGTCAATGTTGTTCATGGTAGTGGCAGGAATAGATGTAGTGCCCGGTTGCATAATGTTAAACTCTGCCAGAAGAAACGGCCTGTTACTGGAGATCCTGCAACACATCCAGATAAAGACCAGATCTCTGCCTCACCAGCCTTGGAAAAGAGTGACGGAGGACTGGAAAGTCTTATGACACCCATTCAGTCACAAAAGGGAATAGTAAACACATTGTCTGGGCAGGTTACTGATAAATTCAGATCCAGAATTCCCAAAACTTTTTCATCAAAGACTGAAGGTTGTTATAAGAGAAAAAGGGTGACATTTGAAACAGAAGCGGTTGGACCTAAGAGAAAAAATATTAAACCCGCATCTTCTGTAAAATCTTCACAAGGAAGGGATATAAGTCACTCGAACAAGGGGAGTACACAAAGATTATCCACAGTTTCTCCAGAGTCATTGGGTCTCAAAAAATCCAGATCTGGAAGGTGGCTTCTACCTCGCTTAGAGTTTTGGCGCAATCAAACACCTATTTATAATATGGTCTGTTAA 1416 0.4138 MVDSTPPTSTISSNGTATSSCFRRTVTLYDWWLVKSSQGNNHRLAISGISSRKEEAVQFFVSAPIIKRYDVFSLETADGIYVITRGFMNEQRTLENGFTPQISKIFLYGFPPNWESYALECIGEGSEADIDSANAIPDNVSAICQEILSDGEENFSPTSLVLPDEALGKCKKPFATKECKASKEMSGIDVTYGSGENRHSTRLRNINVFQRKQQPAYRGPRKHPNKKQISTSTEVETCDSDTAISENVSANLPEIPSDAVEKSFPTSLVSPDKTIGDCNKAFLEDERDMSIKKCEVNVVHGSGRNRCSARLHNVKLCQKKRPVTGDPATHPDKDQISASPALEKSDGGLESLMTPIQSQKGIVNTLSGQVTDKFRSRIPKTFSSKTEGCYKRKRVTFETEAVGPKRKNIKPASSVKSSQGRDISHSNKGSTQRLSTVSPESLGLKKSRSGRWLLPRLEFWRNQTPIYNMVC* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2303 471 MobiDBLite consensus disorder prediction 320 348 - -
Mtr1g2303 471 MobiDBLite consensus disorder prediction 411 442 - -
Mtr1g2303 471 MobiDBLite consensus disorder prediction 212 233 - -
Mtr1g2303 471 Pfam SANTA (SANT Associated) 26 117 IPR015216 -
Mtr1g2303 471 PANTHER MIS18-BINDING PROTEIN 1 6 469 IPR039110 -
Mtr1g2303 471 MobiDBLite consensus disorder prediction 401 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2303 Mtr-Chr1 33514866 33518748 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mtr1g2303 SANTA 8.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2303 - - gmx:100790080 407.527