Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2294 ATGGAAAATGCATTCCGCTCCATCATAAAATACCCAAACAGTGGAATGGACTCTCTGCTCCATCCCATTCCATTCCGCTCCATTCCATTCCGTTCCATTTCACTCCGCTCCATTATGTTCCATCAATCCAAACAGAGCCTTAAGTGCAGCGTCTTGATTAGGGTATATGAGGGTGAGAGAGCAAGAGCTAGTGACAATTATCTGCTTGGTTCATTTGGGACTCCTTGTCTTCCATGTCCCCGTGGCCAGCCCTTGGAGGTATGCTTTTCCATTGATGAAAATGGCATCCTAACTGTTACTGCTAAGGAAATATCTACTGACAATATGAATGTGATCACCATTACTAATGGCAAAGAAAGGTTATCAACGTTAGAAATTGAAAAAATGATTAAAGAAGCTGAGAAATACCATGTGGAAGATATGCAATTCGTAAGGAAGGCCAATGTAATGAGTGCATTAGATTCTTGTGTTTACAATATGAAGAATACATTAAAGAAGAAGGTTGTTAATTTGATGCTCTTCCCATCAAGAAAGTGA 537 0.4004 MENAFRSIIKYPNSGMDSLLHPIPFRSIPFRSISLRSIMFHQSKQSLKCSVLIRVYEGERARASDNYLLGSFGTPCLPCPRGQPLEVCFSIDENGILTVTAKEISTDNMNVITITNGKERLSTLEIEKMIKEAEKYHVEDMQFVRKANVMSALDSCVYNMKNTLKKKVVNLMLFPSRK* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2294 178 Pfam Hsp70 protein 43 167 IPR013126 GO:0005524|GO:0140662
Mtr1g2294 178 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 28 171 IPR029047 -
Mtr1g2294 178 PANTHER HEAT SHOCK 70 KDA PROTEIN 27 173 - -
Mtr1g2294 178 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 49 147 IPR029047 -
Mtr1g2294 178 PANTHER HEAT SHOCK PROTEIN 70KDA 27 173 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2294 Mtr-Chr1 33406758 33407338 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2294 51 169 Calmodulin-binding Proteins AT3G12580 54.472 2.29e-34 125