Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2281 ATGGAGATCTACCTTCAAACACAAAATTGGATAGAAAAAGCAAAGCCATTTATAGCAGTTTTGTTTTTGCAATTTGGATATGCAATTATGGATGTTCTATCAAAGGCTGCATTGAACAGAGGAATGAGCAACTATGTATTTGTTGTGTACCGCCATGCCGTTGCATTCATTGTTATAACCCCTTTTGCACTCTATTTTGATAGGAAAATAAGGCCAAAAATGACAATTTCGATCTTCATTAAGATAGTGCTGCTCAGTTTATTAGAACCGGTAATTGACCAGAATTTATATTTTTTGGGGATGAAGTACACAACGGCAACCTTTGCAGCTGCCATGAGCAATATGCTTCCTGCTATTACTTTTATATTGGCTTCCATTGTTAGACTTGAGAAGATAAAGATAAAAAGTATGCGAAGTCAAGCAAAGGTGTTGGGAACTATAGCAACTGTTTCAGGTGCAATGGTGATGACACTGATGAAAGGTCCAATACTTTTTGAGACATTTGGAGATCATAGCCAAAGCTATCATAGCAGTGGCACAAGTGCTCATCATACAATACTTGGATCTGTGTTGATCACTATAGGATGCTTTAGTTGGGCTTGTTTTGTGATCCTCCAGGCTATTACCCTTGAAACCTACCCAGCAGCACTCTCACTTTCATCATGGATATGTCTGTTCGGCGCAATTGAAGGTGCAGCACTGGCTTTGGTTATGGAAAGGAACAACCCTTCAGTTTGGTCCATAAAATGGGATATGAGACTATTGTCTGCAATTTACACGGGTATATTCTGCTCAGGGTTAGGTTATTACTTACAAGGAGTAGTGATGAAAACAAGAGGTCCAGTTTTTGTCACAACATTTAATCCTTTTTGTATGGTGATTGTTGCTATCATGGGATACTTCCTTCTTGCAGAGCAAATGTTTCTTGGAAGGGTGATAGGTGCATTTATCATTTGTTTGGGTTTGTACCTTGTTGTGTGGGGCAAAAGCAAAGATTACAACAATCCATCAAATGCAATTAGTGAAGAGCATGTTTTGCCGGCTAAGCAAAATGTAGGTGAAAATTGTACTCATGCAGTCATCACTGTTCAGTAA 1095 0.3881 MEIYLQTQNWIEKAKPFIAVLFLQFGYAIMDVLSKAALNRGMSNYVFVVYRHAVAFIVITPFALYFDRKIRPKMTISIFIKIVLLSLLEPVIDQNLYFLGMKYTTATFAAAMSNMLPAITFILASIVRLEKIKIKSMRSQAKVLGTIATVSGAMVMTLMKGPILFETFGDHSQSYHSSGTSAHHTILGSVLITIGCFSWACFVILQAITLETYPAALSLSSWICLFGAIEGAALALVMERNNPSVWSIKWDMRLLSAIYTGIFCSGLGYYLQGVVMKTRGPVFVTTFNPFCMVIVAIMGYFLLAEQMFLGRVIGAFIICLGLYLVVWGKSKDYNNPSNAISEEHVLPAKQNVGENCTHAVITVQ* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2281 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 157 - -
Mtr1g2281 364 PANTHER WAT1-RELATED PROTEIN 10 347 - -
Mtr1g2281 364 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020|GO:0016021
Mtr1g2281 364 Pfam EamA-like transporter family 18 153 IPR000620 GO:0016020|GO:0016021
Mtr1g2281 364 PANTHER WAT1-RELATED PROTEIN 10 347 IPR030184 GO:0016021|GO:0022857
Mtr1g2281 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 222 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2281 Mtr-Chr1 33253355 33258775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2281 5 364 Nodulin-like Gene Family AT2G37460 61.538 4.73e-168 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2281 - - cam:101496299 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2281 1 33253355 33258775 Mtr1g2281 1 33253355 33258775 ECH
Mtr7g3017 7 47056419 47059524 Mtr1g2281 1 33253355 33258775 PCT