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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Mtr1g2268
ATGGCAATTAAGATGTTCGAGTTGAGGAGCAAAACCAAAGCTGATTTGCTGAGCCAGCTGAAGGATCTGAAGGCGGAGCTCGCTTTGCTCCGAGTCGCCAAAGTCACCGGCGGTGCACCTAACAAGCTCTCTAAAATCAAAGTTGTGAGGCTTTCAATTGCACAAGTGTTGACTGTGATTTCACAGAAGCAGAAAGCTGCGCTGAGAGAGGTTTATAAGAATAAAAAGTATTTACCACTTGACCTTCGTCCCAAGAAGACTCGTGCTATTAGAAGACGCCTTACCAAACACCAGGCATCATTGAAGACAGAACGAGAGAAGAAGAAGGAGATATACTTTCCACTAAGAAAGTATGCAATCAAAGCTTAG
369
0.4417
MAIKMFELRSKTKADLLSQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEIYFPLRKYAIKA*
123
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Mtr1g2268
122
Coils
Coil
13
33
-
-
Mtr1g2268
122
SUPERFAMILY
Ribosomal protein L29 (L29p)
3
64
IPR036049
GO:0003735|GO:0005840|GO:0006412
Mtr1g2268
122
Pfam
Ribosomal L29 protein
7
63
IPR001854
GO:0003735|GO:0005840|GO:0006412
Mtr1g2268
122
CDD
Ribosomal_L29_HIP
7
63
-
-
Mtr1g2268
122
PANTHER
60S RIBOSOMAL PROTEIN L35
3
121
IPR045059
GO:0000463|GO:0022625
Mtr1g2268
122
TIGRFAM
L29: ribosomal protein uL29
7
63
IPR001854
GO:0003735|GO:0005840|GO:0006412
Mtr1g2268
122
PANTHER
60S RIBOSOMAL PROTEIN L35-LIKE
3
121
-
-
Mtr1g2268
122
Hamap
50S ribosomal protein L29 [rpmC].
1
63
IPR001854
GO:0003735|GO:0005840|GO:0006412
Mtr1g2268
122
Gene3D
-
1
76
IPR036049
GO:0003735|GO:0005840|GO:0006412
Mtr1g2268
122
Gene3D
-
77
122
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Mtr1g2268
Mtr-Chr1
33047176
33049486
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Mtr1g2268
3
121
Cytoplasmic Ribosomal Protein Gene Family
AT2G39390
88.235
9.74e-70
203
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Mtr1g2268
K02918
-
gmx:100305671
215.698
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