Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2267 ATGAGAATATTTTGCTTGAAGCCTAAAACACCGTCGTTTTCAGTAAATTCCAACAGTTCACCATCTTCAACTTCAAGTTCATCCAAAAGCACAACACCTTCAATCAGAAAAGCTACTACACGAATAGAAGCAGCAGAAGCACTTATACAAAAATGGAACTCCGAAACCTCGGATTATGCCAAAGTAACTTCCATCTTCTACAACGACAGAAACGAAGCCATTCAGTATATTCACCACGTTAACCAACTTCAAAGAGCCATGCACTCGTTACTCGAGCTCGAACCATCGTCTCCGAAACTCATCCATGCTCAAAACCTAATGCAAATCGCTATGAAGAGGCTCCAAAAAGAGTTTTACCAGATATTAACCATGAACCAGGCCTGCTTAGACGCTGAATCCTTCTCTGTCGGATCCTCCAGAACTTCTTTCTGTTCTTTTGATGGAGGAACACCGGAAGAAGATGATATTCGCGCTGCAGAGGATTGTATCTCTGAAGTCGAACGCATTTCTTCCGATGCTGTGGATGATTTGAGAATTATTGCTGAGTGCATGGTAAAAAACGGTTATGGAAAAGAATGTATAAGAGTTTACACCACGGTGAGAAAATCCATCGTCGATGAAGGTATTTATAAACTCAACGTGGAGGAACGAAGTTTCTCGAAGATGAATAAGATGGACTGGGAAGTTCTTGAGATGAAAATCAACAGTTGGTTAGAGGCGGTTAAGATCTCAGTGAGGACGCTCTTCGCCGGAGAGAGGAACCTCTGCGATCGAATCTTCGCTTCGAATTCCATCAAAGAAGCTTGTTTTGCTGAGATTTCTAAGGATGGAGCTATTTTACTTTTAAGATTTCCTGAAGTCGTTGCAAAAACAAAGAAATCAAAGCCGGAGAAGATTTTTCGCTTGCTTGATATGTACGCTACAATCACCGTGTTGTTGCCGGAGATTGAATCAATTTTCTCGTTTAATTCAACAGCAGTCGTTAAATCTCAAGCATATAATTCGCAACATCGATTAATCGAGTGTGTACGAAATCTTCTTTTGGAATTTGAGTCTACAATATTGAAGGATTCTTCCAAATCAGCGGCAAATTTCGGCGGAGTTCATTCCCTGACAGAGGAAACAATGCAGTATCTCATTACTCTTGCAGATTACAGCAACGTGCTCTCTGAGATATTCTTTGACATTCCTCCTCTGTCGAAGTCACCGTTGCCAGAATCTTACTTATACAGTCCAGAATCATCAAACAATACTCCTGAAATGGAGACTGGATTTTCCGTTCGAATAGCGTGGCTGATTCTGGTTCTTCTTTGTAAAATTGATAGCAAATCGAAACAATGCAAGAATGTATCGTTATCATATCTATTTCTCGCAAACAATCTCCGGCACGTGGTGGAGAAGGTGCGTCAATCGAACTTGCAATACGTTCTCGGCGACGATTGGTTGTTGAATCACATGGAGAAGGTGAAAAAGTTGATAGAGAAGTACGAGAGAGTAGCGTGGGGAGAAGTGTTTTCGTCATTGCCGGAAAATCCAACGGCGGCAATGACAGTGGCGAAGGCGAGCAAGGTGTTTATGAAAATCAAACTGGAATTCGAGAAAGCTTATCGGAATCAGAGTTCATTTGTTTTGCCGGAATCGGAATTTCGCGAAGAGATAAAAGCTTCTCTCGCAAGAAAAATAATTCCAATTTATCGCGAGTTATATACTCACCAGATTATGGCGGGAACCGTTAGTGAAATGAAGGAATATTTCGTTTTTACCCCTGAAGATGTTGAGAAATACCTGGGGAATCTCTTCTATGACGGAAGAGCTTAA 1818 0.4131 MRIFCLKPKTPSFSVNSNSSPSSTSSSSKSTTPSIRKATTRIEAAEALIQKWNSETSDYAKVTSIFYNDRNEAIQYIHHVNQLQRAMHSLLELEPSSPKLIHAQNLMQIAMKRLQKEFYQILTMNQACLDAESFSVGSSRTSFCSFDGGTPEEDDIRAAEDCISEVERISSDAVDDLRIIAECMVKNGYGKECIRVYTTVRKSIVDEGIYKLNVEERSFSKMNKMDWEVLEMKINSWLEAVKISVRTLFAGERNLCDRIFASNSIKEACFAEISKDGAILLLRFPEVVAKTKKSKPEKIFRLLDMYATITVLLPEIESIFSFNSTAVVKSQAYNSQHRLIECVRNLLLEFESTILKDSSKSAANFGGVHSLTEETMQYLITLADYSNVLSEIFFDIPPLSKSPLPESYLYSPESSNNTPEMETGFSVRIAWLILVLLCKIDSKSKQCKNVSLSYLFLANNLRHVVEKVRQSNLQYVLGDDWLLNHMEKVKKLIEKYERVAWGEVFSSLPENPTAAMTVAKASKVFMKIKLEFEKAYRNQSSFVLPESEFREEIKASLARKIIPIYRELYTHQIMAGTVSEMKEYFVFTPEDVEKYLGNLFYDGRA* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2267 605 Coils Coil 35 55 - -
Mtr1g2267 605 MobiDBLite consensus disorder prediction 10 37 - -
Mtr1g2267 605 Pfam Exo70 exocyst complex subunit 236 596 IPR046364 GO:0000145|GO:0005546|GO:0006887
Mtr1g2267 605 Gene3D Exocyst complex component Exo70 50 604 - -
Mtr1g2267 605 SUPERFAMILY Cullin repeat-like 35 600 IPR016159 -
Mtr1g2267 605 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 1 602 - -
Mtr1g2267 605 MobiDBLite consensus disorder prediction 9 37 - -
Mtr1g2267 605 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 602 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2267 Mtr-Chr1 33040990 33043299 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2267 42 600 EXO70 exocyst subunit family AT3G09520 48.944 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2267 K07195 - gmx:100798477 727.628