Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2251 ATGGTGAGATCTTGCTGGAAGCCAGCTGTAGATGGTGATGATGGGGATGGGAGTGGAAGTGGAAGTGGTGAGAGAGTTGATGGATTGTTATGGTACAAAGATTTAGGGAACCATATTTATGGTGAATTTTCAATGGCTGTGATTCAAGCTAATAGTTCATTGGAGGATAGAAGTGAATTTGAGTCTGGACCTTTGAGTTCTAACCATTTGGGTCCTCAAGGGACTTTTATTGGTGTTTATGATGGTCATGGTGGAGCTGAAGCTTCTCAATTTGTCAGTGACAATCTTTTTTGCAATCTCAAAAGGCTTGCAGCAGAAAATCAAGGCTTGTCAGAAAATGTGATCAAAAGGGCATTTTCAGCAACAGAGGAGAGTTTTCTATCACTTGTGAATAAACAGTGGCTAAGACAGCCACATATTGCATCAGCAGGTACTTGTTGTTTGGTGGGGATAATTTGCAATGGACTGGTATATATTGCAAATTCTGGTGACTCAAGGGTGGTGTTAGGAAGACTAGAGAGGGCAACAAGGGAAACATCAGCCATACAATTATCTGCAGAACATAATGTTAACCTTGAAAGAGTGAGAGATGAACTTAGATTAAGACACCCTTATGATTCACAAATTGTGGTTATGAGACACAATGTTTGGCGCGTCAAAGGCCTCATACAGGTTTCGCGATCGATCGGTGATGCATATCTGAAGAAAGCAGAATTCAATAGGGAGCCTCTACCATCAAAGTTCAGACTCGCTGAAACATTTTTCAAACCAATTCTCAGCTGTGAGCCATCAATTTCAACACATAAACTTCATCCTGATGACCAATTTCTCATATTTGCTTCGGATGGATTATGGGAGCAGCTTAGCAACCAAGAGGCTGTTAACATAGTCAGCAACAATCCACCTAATGGAATTGCAAGAAGACTTGTGAAAGCAGCACTTAGAGAAGCAGCAAGGAAAAGAGAGATGAGACTAGCAGACCTTCAAAAGATTGAACAAGGAACAAGGAGACACTTCCATGATGATATAACTGTGATTGTTGTGTTTCTTAATCACAAACTGATTGATAACAGCTCTCTTTGGGGTTCTTCTCTTTCAATCAAAGGAGGTGGATCTGCCAATCACTAA 1128 0.4078 MVRSCWKPAVDGDDGDGSGSGSGERVDGLLWYKDLGNHIYGEFSMAVIQANSSLEDRSEFESGPLSSNHLGPQGTFIGVYDGHGGAEASQFVSDNLFCNLKRLAAENQGLSENVIKRAFSATEESFLSLVNKQWLRQPHIASAGTCCLVGIICNGLVYIANSGDSRVVLGRLERATRETSAIQLSAEHNVNLERVRDELRLRHPYDSQIVVMRHNVWRVKGLIQVSRSIGDAYLKKAEFNREPLPSKFRLAETFFKPILSCEPSISTHKLHPDDQFLIFASDGLWEQLSNQEAVNIVSNNPPNGIARRLVKAALREAARKREMRLADLQKIEQGTRRHFHDDITVIVVFLNHKLIDNSSLWGSSLSIKGGGSANH* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2251 375 CDD PP2Cc 40 350 IPR001932 -
Mtr1g2251 375 SMART PP2C_4 36 348 IPR001932 -
Mtr1g2251 375 ProSitePatterns PPM-type phosphatase domain signature. 76 84 IPR000222 GO:0043169
Mtr1g2251 375 PANTHER ALPHABET, ISOFORM E-RELATED 3 373 - -
Mtr1g2251 375 MobiDBLite consensus disorder prediction 1 21 - -
Mtr1g2251 375 SUPERFAMILY PP2C-like 51 351 IPR036457 -
Mtr1g2251 375 Pfam Protein phosphatase 2C 59 319 IPR001932 -
Mtr1g2251 375 Gene3D - 33 359 IPR036457 -
Mtr1g2251 375 ProSiteProfiles PPM-type phosphatase domain profile. 39 350 IPR001932 -
Mtr1g2251 375 PANTHER SERINE/THREONINE PHOSPHATASE FAMILY, 2C DOMAIN PROTEIN 3 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2251 Mtr-Chr1 32869612 32872917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2251 1 371 PP2C-type Phosphatase Gene Family AT3G12620 66.129 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2251 K01102 - gmx:100819870 612.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2251 1 32869612 32872917 Mtr1g2251 1 32869612 32872917 ECH