Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2247 ATGGCCACTATTGGTGTCAAACCAGTTCTCCCTCCTCCGTTAACTTCAACTTCACAACCACCACCTCTTTTTGATGGAACCACCAGGTTGTACGTAAGTTATAGCTGCCCTTTTGCACAACGTACGTGGATCACTAGAAACTACAAGGGGCTACAAAACAATATCCATTTGGTTCCTATTGACCTTCAAAATAGGCCTGCTTGGTACAAGGAAAAAGTATATCCTGAAAATAAGGTGCCATCTTTGGAGCACAATGGAAAGGTGTTGGGAGAAAGTCTTGATTTGATCAAATATATTGATGCTAACTTTGATGGACCACCTCTCTTTCCCAATGATCCTGCCAAGAAAGAGTTTGCTGAGCAGTTGTTATCACATGTTGATACCTTCACCAAGGAACTGTTTGTTTCACTAAAAGGGGATACTGTGCAACAATCCAGTCCTACTTTTGAATTCTTGGAGAATGCTCTTGGTAAATTTGATGATGGGCCATTCTTGCTTGGTCAACTCAGCTTGGTTGATATTGCTTATATTCCCTTTGTTGAAAGATTCCATATTGTTCTTGCTGAGGTTTTCAAACATGACATTACAGAAGGAAGGCCTAAACTTGCAACATGGATTGAGGAGCTGAACAAAATTGATGCTTATACACAGACAAGAGTGGATCCTCAAGAAATAGTTGATCTTTTCAAGAATCGTTTTCTGCCTAAACTTGCAACATGGATTGAGGAGTTGAACAAGATTGGTGCTTATACACAGACAAGAGTGGATCCTCAAATAATTGTTGATAAATTCAAGGAGCGTCATATGCCTCAACAGTGA 819 0.4005 MATIGVKPVLPPPLTSTSQPPPLFDGTTRLYVSYSCPFAQRTWITRNYKGLQNNIHLVPIDLQNRPAWYKEKVYPENKVPSLEHNGKVLGESLDLIKYIDANFDGPPLFPNDPAKKEFAEQLLSHVDTFTKELFVSLKGDTVQQSSPTFEFLENALGKFDDGPFLLGQLSLVDIAYIPFVERFHIVLAEVFKHDITEGRPKLATWIEELNKIDAYTQTRVDPQEIVDLFKNRFLPKLATWIEELNKIGAYTQTRVDPQIIVDKFKERHMPQQ* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2247 272 SFLD Glutathione Transferase (cytosolic) 29 210 IPR040079 -
Mtr1g2247 272 SUPERFAMILY Thioredoxin-like 18 108 IPR036249 -
Mtr1g2247 272 PANTHER GLUTATHIONE S-TRANSFERASE L1 235 271 IPR044629 GO:0004364
Mtr1g2247 272 PANTHER GLUTATHIONE S-TRANSFERASE L1 1 236 IPR044629 GO:0004364
Mtr1g2247 272 CDD GST_C_Lambda 112 230 - -
Mtr1g2247 272 Gene3D - 235 271 - -
Mtr1g2247 272 Gene3D - 105 234 - -
Mtr1g2247 272 Gene3D Glutaredoxin 1 104 - -
Mtr1g2247 272 SFLD Main (cytGST) 29 210 - -
Mtr1g2247 272 Pfam Glutathione S-transferase, N-terminal domain 30 107 IPR004045 -
Mtr1g2247 272 PANTHER GLUTATHIONE S-TRANSFERASE TAU 235 271 - -
Mtr1g2247 272 PANTHER GLUTATHIONE S-TRANSFERASE TAU 1 236 - -
Mtr1g2247 272 Pfam Glutathione S-transferase, C-terminal domain 144 207 - -
Mtr1g2247 272 SUPERFAMILY GST C-terminal domain-like 103 233 IPR036282 -
Mtr1g2247 272 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2247 Mtr-Chr1 32840954 32855932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2247 11 234 Glutathione S-transferase Gene Family AT5G02790 68.750 9.41e-119 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2247 K00799 - gmx:547597 411.764