Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2245 ATGGGTTGGATTCCATGTTCTGGAGGTTCTAATACTAAGAAGAAAAAGATAAAGAAGAAGAAATTGGAGGAAGTGCAGGATATGCGTGATGCTCCGATCAAAGTTGTATCTCAGCCTCAAGGAATCGCCAAACATAATATGTTATCAACATATACAAGTAGAGTGACGACATTACCATATTGGAAATTGAAGAAGAATTCATCTATGAATTCCAGAAATTCCTCCAAAAATGGAGACTCTGAACACATTGCCGCACAAACATTCCCTTTCCGTGAGTTAGCAACCGCTACTAGAAATTTTAGAGCAGACTGTCTTCTGGGTGAGGGAGGCTTTGGCAGAGTATACAAAGGGCATTTAGAATCTAGTAATCAGACTGTTGCAATCAAGCAACTTGACCGAAATGGGCTACAAGGGAATAGAGAATTCCTTGTTGAAGTGTTGATGTTAAGTCTTCTTCACCACCCTAACCTTGTCAACCTGATTGGTTACTGTGCTGATGGTGATCAAAGGCTTCTAGTTTATGAATATATGCCATTAGGATCCTTGGAAGACCACTTACATGATATTTCTCCTGGCAAGAAACGACTTGACTGGAGCACAAGAATGAAAATAGCTGCCGGGGCAGCAAAAGGGTTGGAATATCTACATGACAAAGCTAACCCTCCGGTCATATACCGAGATTTAAAGTGCTCTAACATTTTGCTTGGTGAAGGGTATCATCCTAAGCTATCTGATTTTGGTTTGGCTAAAGTTGGTCCTGTGGGCGAAAACACTCATGTATCAACAAGGGTTATGGGAACCTATGGATATTGTGCTCCAGAGTATGCAATGACAGGTCAACTGACTCTGAAATCAGATGTTTATAGTTTTGGTGTAGTTCTTCTGGAAATAATTACGGGAAGGAAAGCTATCGACAATTCAAAATGTGCGGCAGAGCAGAATCTTGTTGCATGGGCTAGACCCCTGTTTAAAGATCGAAGAAAATTCACACAAATGGCTGATCCAATGCTCCAAGGTCAATATCCTTCAAGAGGGATATACCAAGCCCTTGCCGTTGCAGCAATGTGTGTTCAGGAACAGGCAAATATGCGTCCAGTTATAGCTGATGTGGTGACAGCTCTGAGTTACCTTGCTTCACAGAGATATGAGCCCAATACACAGACGGTTCAAAGCTCTCGCCTCGGTCCTGGTACTCCTCCTCGAACCAGGAGGGGAGTTTGA 1221 0.4251 MGWIPCSGGSNTKKKKIKKKKLEEVQDMRDAPIKVVSQPQGIAKHNMLSTYTSRVTTLPYWKLKKNSSMNSRNSSKNGDSEHIAAQTFPFRELATATRNFRADCLLGEGGFGRVYKGHLESSNQTVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDISPGKKRLDWSTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKCAAEQNLVAWARPLFKDRRKFTQMADPMLQGQYPSRGIYQALAVAAMCVQEQANMRPVIADVVTALSYLASQRYEPNTQTVQSSRLGPGTPPRTRRGV* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2245 406 Gene3D Transferase(Phosphotransferase) domain 1 177 394 - -
Mtr1g2245 406 ProSitePatterns Protein kinases ATP-binding region signature. 106 129 IPR017441 GO:0005524
Mtr1g2245 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Mtr1g2245 406 CDD STKc_IRAK 106 374 - -
Mtr1g2245 406 MobiDBLite consensus disorder prediction 386 406 - -
Mtr1g2245 406 SMART serkin_6 100 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2245 406 Pfam Protein tyrosine and serine/threonine kinase 105 373 IPR001245 GO:0004672|GO:0006468
Mtr1g2245 406 ProSiteProfiles Protein kinase domain profile. 100 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2245 406 SUPERFAMILY Protein kinase-like (PK-like) 80 374 IPR011009 -
Mtr1g2245 406 Gene3D Phosphorylase Kinase; domain 1 69 176 - -
Mtr1g2245 406 PANTHER OS07G0668900 PROTEIN 1 404 - -
Mtr1g2245 406 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL7-RELATED 1 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2245 Mtr-Chr1 32816877 32822227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2245 68 379 Glycoside Hydrolase AT3G07070 68.254 1.32e-162 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mtr1g2245 PK_Tyr_Ser-Thr 6.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2245 - - gmx:100776041 636.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4505 1 56665424 56672945 Mtr1g2245 1 32816877 32822227 ECH
Mtr1g2245 1 32816877 32822227 Mtr1g2245 1 32816877 32822227 ECH
Mtr7g3049 7 47306090 47309513 Mtr1g2245 1 32816877 32822227 PCT