Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2244 ATGACAAGGGGTATCCAGATGAGTGTCAATGGTGACTGTAAAGAACTTGGTCAGCGTTTGCGGGATGGGAAGAACAACTTAAATGAAGGAGTAGCTGGTGAGGATGCTGAAGTGAAATGTAATGGAGTGACTGATGGAGTTAAGGTTGGAGAGGGAGGGAATGGCGAATCCTCTTCTGTTCAGCAGCAAGTACCGCAGCAACAGTCTCAAGGGGCAATTATTTGTTGGGAGAGGTTTTTACATATTAGATCCCTTAAGGTCTTGCTTGTGGAGTATGATGACTGTACCCGCCATATTGTCACTGCATTGCTTCGCAATTGTAGTTATGAAGTTATTGAAGCAGCAAATGGATTGCAAGCTTGGAAGGTTTTGGAGGATTTAACCAATCACATTGATCTCATTTTAACTGAGGTGGCAATGCCTGGCTTATCAGGCATTGCACTTCTATACAAGATTATGGGCCACCCAACACGGAAAAATGTTCCAGTAATTATGATGTCATCTCATGACTCTATGGGTTTAGTCTTTAAGTGTTTGTCAAAGGGGGCTGTCGACTTTCTAGTAAAACCCATACGCAAGAATGAGCTTAAAAACCTGTGGCAGCATGTCTGGAGGAGATGTCATAGTTCTAGTGGGAGTGGCAGTGAAAGTGGCACACAAACCCAGAAATCGGTTAAATCAAGGAGTCTTGAGAAGTTTGATAACAATTCGGGAAGCAACGACGAGCAAGATAATGGAAGTTTAGGCCTGAACAATGGGGATGGTAGTGACAATGGTAGTGGCACTCAGAGCTCCTGGACCAAACGAGCTGTAGAAGTTGACAGTCCTAAATCAGGTTCTCAGTGGGATCAGATAGCTGAGTGTCCCGATAGCACTTGTGCTCAAGTTGTTCACTCCAATGCTGAAATATGCAGGGAAAAGATGGTTCCTCCAGTCTTAAAGGAGTGTCTAGAGAAAAAGGAACAAATAGTCAAAATTGCAGGTTCAAAACATATCAACAGATTTGATGTGGGCCCCTCTAAATTCAATGAGCAAATTAATAGAGGACAGATGGACCCTAATTGTGAGAATCAATCTGGCAAGCTAAGATGCAAAGTGCTTTCATTATCTGATGCAGTTACCAGCCCTTCGGACTCCCAAATGCAAAGCGGAGAAATTGAAGCACTAAATAGAAGACCCAACTTCTCAGATATTGACAACAAAGGTACTAATAATGATGAGGAGTTGCCATCTCTTGAGCTCAGTTTAAAGAGGCCTAGAGAAGTTGAAGAAGCTGGTGCTGCAATTCAGGATGAACGGAATGTTTTAAGACGTTCTGATCAGTCTGCTTTCTCAAGGTACAATGCCACCTTCAATGCTAAGAAGTCTCCCACTGGATGTGTCGGAAGCAACTCTCCGCCTAATAACAGCTTAGAAGTTACAAAGAAAGATTCATCCCGTGATATTCAATCTCATTCTAGTGGCAATCCTCCTAACCAGAACTCAAATGATGCTAGCAACAACATTGATATGGGTTCCACTACTAATAATGCTTTTACCAAATCTGCAGTTATAAGAGAGCCAGCAGAGGCATCAACAACCAAATTTTTGTACCAAACGTCTGCTTTCCAGCCCATAAAAAACAGCCTCATGTGTACCTCTCAACAAGTTGTCTCACATAATAATGAAGATACAACAACAATCCTGGCACCACCTAAAATTGATAAGGGTTCTGCTACTCAGGATTTCCATCACCATTATGAAAACCACAGCAATGTTGCTAACATGCAGCACCAGTTGCCACCTGAGCATGATGCCGAATCTTCAAAGGAAATGACTGTTGTTGCTCCACACTGTGGGTCATCAAATATGGTCAAAGGGCCAGTTGAAGGTAATACGGGAAATTACAGTATCAATAGAAGTGCTTCAGGAAGCAACCATGGAAGCAATGGACAAAATGGGAGCAGCACTGCAATTAATGCTGGAGGGACAAACATAGACAACAACAATGGACTCGCTGGGAATAGCGGCAGTGGTGATGCTAGTGGAAATGGAAGTGGCAACAGAGTAGATCAAAGCAAGAATTTTCAAAGGGAAGCAGCCCTAATTAAATTTCGCCAAAAAAGAAAGGAGAGAAAAGAGAGGTGCTTTCATAAGCAGGTTCGATATCAGAGCAGGCAGAAATTAGCTGAACAACGACCACGATATCGAGGGCAATTTGTGCGACAGTCCTCGAATGGTAATGCAAGTGAGGCAACAGATAGTTGA 2247 0.429 MTRGIQMSVNGDCKELGQRLRDGKNNLNEGVAGEDAEVKCNGVTDGVKVGEGGNGESSSVQQQVPQQQSQGAIICWERFLHIRSLKVLLVEYDDCTRHIVTALLRNCSYEVIEAANGLQAWKVLEDLTNHIDLILTEVAMPGLSGIALLYKIMGHPTRKNVPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSVKSRSLEKFDNNSGSNDEQDNGSLGLNNGDGSDNGSGTQSSWTKRAVEVDSPKSGSQWDQIAECPDSTCAQVVHSNAEICREKMVPPVLKECLEKKEQIVKIAGSKHINRFDVGPSKFNEQINRGQMDPNCENQSGKLRCKVLSLSDAVTSPSDSQMQSGEIEALNRRPNFSDIDNKGTNNDEELPSLELSLKRPREVEEAGAAIQDERNVLRRSDQSAFSRYNATFNAKKSPTGCVGSNSPPNNSLEVTKKDSSRDIQSHSSGNPPNQNSNDASNNIDMGSTTNNAFTKSAVIREPAEASTTKFLYQTSAFQPIKNSLMCTSQQVVSHNNEDTTTILAPPKIDKGSATQDFHHHYENHSNVANMQHQLPPEHDAESSKEMTVVAPHCGSSNMVKGPVEGNTGNYSINRSASGSNHGSNGQNGSSTAINAGGTNIDNNNGLAGNSGSGDASGNGSGNRVDQSKNFQREAALIKFRQKRKERKERCFHKQVRYQSRQKLAEQRPRYRGQFVRQSSNGNASEATDS* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2244 748 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE PRR37 36 725 - -
Mtr1g2244 748 PANTHER TWO-COMPONENT RESPONSE REGULATOR 36 725 IPR045279 GO:0009736
Mtr1g2244 748 MobiDBLite consensus disorder prediction 401 417 - -
Mtr1g2244 748 MobiDBLite consensus disorder prediction 700 748 - -
Mtr1g2244 748 Gene3D - 84 247 - -
Mtr1g2244 748 ProSiteProfiles CCT domain profile. 694 736 IPR010402 GO:0005515
Mtr1g2244 748 MobiDBLite consensus disorder prediction 619 688 - -
Mtr1g2244 748 MobiDBLite consensus disorder prediction 209 226 - -
Mtr1g2244 748 Pfam CCT motif 691 736 IPR010402 GO:0005515
Mtr1g2244 748 SUPERFAMILY CheY-like 83 209 IPR011006 -
Mtr1g2244 748 Pfam Response regulator receiver domain 87 198 IPR001789 GO:0000160
Mtr1g2244 748 MobiDBLite consensus disorder prediction 373 417 - -
Mtr1g2244 748 MobiDBLite consensus disorder prediction 239 271 - -
Mtr1g2244 748 ProSiteProfiles Response regulatory domain profile. 86 204 IPR001789 GO:0000160
Mtr1g2244 748 MobiDBLite consensus disorder prediction 710 728 - -
Mtr1g2244 748 MobiDBLite consensus disorder prediction 611 688 - -
Mtr1g2244 748 MobiDBLite consensus disorder prediction 373 389 - -
Mtr1g2244 748 MobiDBLite consensus disorder prediction 209 283 - -
Mtr1g2244 748 MobiDBLite consensus disorder prediction 731 748 - -
Mtr1g2244 748 MobiDBLite consensus disorder prediction 455 473 - -
Mtr1g2244 748 MobiDBLite consensus disorder prediction 483 508 - -
Mtr1g2244 748 SMART REC_2 85 200 IPR001789 GO:0000160
Mtr1g2244 748 MobiDBLite consensus disorder prediction 455 508 - -
Mtr1g2244 748 CDD psREC_PRR 87 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2244 Mtr-Chr1 32797393 32809420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2244 161 738 Response Regulator Gene Family AT5G02810 46.216 2.57e-108 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Mtr1g2244 Response_reg 4.3e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2244 K12129 - gmx:100796933 1091.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4505 1 56665424 56672945 Mtr1g2244 1 32797393 32809420 ECH
Mtr1g2244 1 32797393 32809420 Mtr1g2244 1 32797393 32809420 ECH