Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2235 ATGGAACCTTTCTTCCTCTTCTCTCTCTCATTCATTCTTCTACTTTTCTTCCCTTTTTCCTATGCCCAGATGCCAGGTTTTGTAAGTTTGGATTGTGGAGGTGATAAAAATTTCACTGATGAAATTGGTCTTAAATGGACTCCTGATGATAAAATTTCTTATGGAGAAATAAGCAATATTTCGGTTGCTAATGAGACGCGGAAGCAATACACGACACTTCGACACTTTCCTGCTGATTCCAGAAAATACTGCTACACACTTGATGTTGTCACCAGGACAAGGTATCTACTGAGGGCAACATTTTTGTATGGAAACTTTGATAACAACAATGTTTATCCGAAATTCGACATTTCTTTTGGGGCTACTCATTGGTCTACTATTGTTATATCTGATGAAAACACTATAGAAGTAAGAGAGCTTATATTTTTGGCTTCCAGTCCTACAGTTAGTGTATGTCTATCCAATGCAACAACTGGGGAGCCATTCATATCTACACTTGAACTTAGGCAATTCAATGGCTCGGTTTATTTTACATTCTACGAGGAACACTTTTACCTCAGTGTTTCTGCGAGGATAAATTTTGGTGCAGAGAGTGATGCTCCAGTCAGGTATCCCGATGACCCATTTGACAGAATTTGGGAGTCAGATTCTGTCAAGAAAGCAAATTACCTTGTTGATGTTGCTGATGGAACCAAGAAAATTTCGACTAATGTGTCCATTGATGTTAGAGGTAATGGAGATGAAATGCCACCAGTGAAAGTAATGCAGACAGCTGTAGTAGGTACAAATGGATCTCTAACTTACCGGTTGAACTTGGATGGTTTTCCAGCCACCGGATGGGCATACAGCTATCTTGCAGAGATAGAAGAATTTCCGCGAAATGAATCTCGAAAATTCAGGCTAGTACTTCCAGGACAGGCTGATATTAGTAAAGCCGTGGTAAATATCGAAGAGAATGCTCTACGCAAATATCGTCTTTATGAACCAGGATTTTACAATCTATCCCTACCCTTTGTGATGTCCTTTAAATTAGGAAAAACAGCTGATTCTTCCAAGGGTCCTCTTCTCAATGCTATGGAGATTAATAAGTATCTAGAGAAAAATGACGGCTCTCCTGATGGAGAAGCTATATCTAGTGTACTTTCCCACTACTCTTCAGAAAATTGGGCACAAGAAGGGGGTGATCCATGTTTACCTGTTCCATGGTCGTGGGTCCGATGTAGCTCAGATCAACAGCCAAGAATAGTTTCAATTTTGTTGTCTAGGAAAAACATGACCGGAGACATTCCTTTGGACATCACTAGATTGACCGGTTTGGTTGAACTATGGCTTGATGGAAATATGCTGACAGGCCCAATACCAGATTTCACTGGATGCATGGACTTAAAGATCATTCATCTTGAGAACAATCAGTTGACGGGTGTACTCCCAGCCACTTTGGGGAACCTTCCAAATTTGAGGGAACTGTATGTCCAGAACAATATGTTATCTGGAACTGTACCGTCAGAACTTTTGAGCAAAGATTTGGTTTTAAACTACTCTGGAAACAACGGTCTTCATAAAGGTAGAAGAAAAAAGAACCAATTGTATGTGATTATTGGTTCAGCACTCGGGGCCGCCATTCTGCTTTTGGCTACTATTATATCTTGCTGGTGTATGCATAAAGGAAAGAAGAAATATCATGATCAAGACCACCTTATTTCTCACTCTACTCAAAACCTGGAATCTAAAAGTGATGGTCATGCAGAAATTGCTCACTGCTTTAGTTTTTCTGAAATTGAAAGCTCTACAAATAATTTTGAGAAGAAAATTGGCTCTGGAGGTTTTGGAGTTGTTTACTATGGGAAACAGAAAGATGGAAAAGAGATAGCAGTTAAAGTTTTAACTAGTAATTCCTACCAAGGCAAAAAAGAGTTCTCTAATGAGGTGATTCTTCTGTCAAGGATACATCACAGAAACTTGGTACAGCTTCTAGGTTATTGTCGAGAAGAAGGGAATAGTATACTTATTTATGAGTTCATGCATAATGGAACTCTCAAGGAACATCTTTATAGGCCATTAACGCGTGGACAAAGTATCAATTGGATTAAGCGACTCGAGATTGCCGAAGATTCTGCCAAAGGGATTGAGTATCTTCACACAGGATGTGTCCCTGCAGTTATCCATAGAGACCTAAAAAGCAGCAATATTCTTCTTGACAAGGACATGAGAGCCAAGGTTTCAGATTTTGGACTTTCGAAACTCGCTGTTGATGGAGCCTCCCATGTTTCTAGCGTAGTTCGGGGTACAGTAGGATATCTGGATCCCGAGTACTATATTTCTCAGCAGCTGACTGACAAGAGTGATATATACAGTTTTGGGGTGATTCTTCTTGAACTCATATCTGGTCAAGAAGCAATATCTAATGACAACTTTGGTGCTAATTGTCGAAACTTAGTCCAATGGGCAAAATTGCACATTGAGAGTGGAGATATACAAGGAATAATTGATCCAGCATTACGCGGAGAGTATGACCTACAATCGATGTGGAAGATAGCAGAGAAAGCGTTGATGTGCGTTGCAGCACACGCACACATGCGGCCATCAATATCAGAAGTAGTGAAGGAAATTCAAGACGCAATTGGTATTGAAAGAGAGAGGGAAAGTAGCATTTCAGATGAGATGATGACAAGAAATTCAGTACACTCTTCCATCAACATGGGTTCTATGGATCTTGCTGCGACCGAGAATTACCTAGCTATTGATGATTCCATTGCTAGACCCACTGCACGATAG 2775 0.4018 MEPFFLFSLSFILLLFFPFSYAQMPGFVSLDCGGDKNFTDEIGLKWTPDDKISYGEISNISVANETRKQYTTLRHFPADSRKYCYTLDVVTRTRYLLRATFLYGNFDNNNVYPKFDISFGATHWSTIVISDENTIEVRELIFLASSPTVSVCLSNATTGEPFISTLELRQFNGSVYFTFYEEHFYLSVSARINFGAESDAPVRYPDDPFDRIWESDSVKKANYLVDVADGTKKISTNVSIDVRGNGDEMPPVKVMQTAVVGTNGSLTYRLNLDGFPATGWAYSYLAEIEEFPRNESRKFRLVLPGQADISKAVVNIEENALRKYRLYEPGFYNLSLPFVMSFKLGKTADSSKGPLLNAMEINKYLEKNDGSPDGEAISSVLSHYSSENWAQEGGDPCLPVPWSWVRCSSDQQPRIVSILLSRKNMTGDIPLDITRLTGLVELWLDGNMLTGPIPDFTGCMDLKIIHLENNQLTGVLPATLGNLPNLRELYVQNNMLSGTVPSELLSKDLVLNYSGNNGLHKGRRKKNQLYVIIGSALGAAILLLATIISCWCMHKGKKKYHDQDHLISHSTQNLESKSDGHAEIAHCFSFSEIESSTNNFEKKIGSGGFGVVYYGKQKDGKEIAVKVLTSNSYQGKKEFSNEVILLSRIHHRNLVQLLGYCREEGNSILIYEFMHNGTLKEHLYRPLTRGQSINWIKRLEIAEDSAKGIEYLHTGCVPAVIHRDLKSSNILLDKDMRAKVSDFGLSKLAVDGASHVSSVVRGTVGYLDPEYYISQQLTDKSDIYSFGVILLELISGQEAISNDNFGANCRNLVQWAKLHIESGDIQGIIDPALRGEYDLQSMWKIAEKALMCVAAHAHMRPSISEVVKEIQDAIGIERERESSISDEMMTRNSVHSSINMGSMDLAATENYLAIDDSIARPTAR* 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2235 924 CDD STKc_IRAK 604 871 - -
Mtr1g2235 924 Pfam Protein tyrosine and serine/threonine kinase 600 869 IPR001245 GO:0004672|GO:0006468
Mtr1g2235 924 Gene3D Phosphorylase Kinase; domain 1 570 673 - -
Mtr1g2235 924 PANTHER OS07G0107800 PROTEIN-RELATED 12 924 - -
Mtr1g2235 924 SUPERFAMILY Protein kinase-like (PK-like) 585 871 IPR011009 -
Mtr1g2235 924 ProSiteProfiles Protein kinase domain profile. 598 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g2235 924 Pfam Malectin-like domain 30 362 IPR024788 -
Mtr1g2235 924 PANTHER TYROSINE KINASE DOMAIN PROTEIN 12 924 - -
Mtr1g2235 924 Gene3D Transferase(Phosphotransferase) domain 1 674 897 - -
Mtr1g2235 924 SUPERFAMILY L domain-like 400 515 - -
Mtr1g2235 924 Gene3D Ribonuclease Inhibitor 375 527 IPR032675 -
Mtr1g2235 924 ProSitePatterns Serine/Threonine protein kinases active-site signature. 720 732 IPR008271 GO:0004672|GO:0006468
Mtr1g2235 924 ProSitePatterns Protein kinases ATP-binding region signature. 604 626 IPR017441 GO:0005524
Mtr1g2235 924 Pfam Leucine rich repeat 456 496 IPR001611 GO:0005515
Mtr1g2235 924 SMART serkin_6 598 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2235 Mtr-Chr1 32712349 32718384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2235 17 708 Receptor kinase-like Gene Family AT2G37050 65.674 0.0 967
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mtr1g2235 Malectin_like 1.9e-77 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2235 - - gmx:100798007 1541.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3056 7 47371055 47376176 Mtr1g2235 1 32712349 32718384 PCT