Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2225 ATGGGGAAGAATAAGCCAAATTGGTTTTCTAATGTCAAGAAAGCTCTTAGCCCTGACTCTAAACAAAACAAACATCAGAATTCAAGTGGATCAAAGAAGAAATGGTTTGGGAAGAAAAAATTGAACACTTCAGATTCATATCCAGAAACTGATCAAGCACCTCCTTTTCATCCACCTGAGGCTGAGGAGGAGATTATTTTAACTCATGTTCAGAATCAAAACAATCATGATCATGTTGAAGTTGTACCAGATGTGGATGTTGATGTACCTGTTCCTGATGTTCAGATAGAAACTGTTGAGGTTCAAGCCGCTCCAATTGTTCAGGTTGCTAGTAAACCGAATGATGAAGTTGCGGCAATCATGATTCAAACCACTTTTCGGCGATACTTGGCAAGAAGAGCATTTCGGGCTTTAAGGGGGCTGAACAGGTTAAGAGCACTAATGGAAGGGCCAGTGGTAAAACGTCAAGCCATTAGTACCCTCCGCTCTATGCAGACTTTAGGTCATGTGCAATCCCAGATTCGTTCGAGGCGGGTCAGGATGTTAGAGGAGACTCAAGCTCTGCAAAAACAGCTCTTACAGAAGCACACAAAAGAACTAGAGATACAGATTGGGGAGGAATGGGATGAAAGCATACAATCAAGAGAGCAAATTGAAGCCAAGTTACTAAGCAAGTACGAGGCTACGATGAGAAGAGAAAGAGCAATGGCTTATTCATTCACTCATCAGAAAAACGGGCGGAATGCATCGAAATCTATAAATCCAATGTTCATGGATCCAACCAATCCTAGTTGGGGATGGAGCTGGTTAGAACGTTGGATGGCAGCCAACCAAAGCCTGATGGAAAAGGAGAACAATTCATCTGCAAAAAGTTCAATCCGTGGCATTACCAGTGCTGAAATCAGCAAATCATTTGCTCGTTTCCAGCTCAATTCCGAAAATCATTCTCCAACAGCGAGCCAAAATCCAGGTTCACCTAACTTCCAATCCAACTCAAAGCCTCCCAAGCCAGCAATTGTCAAGAAACTGAATAAGGCTAGTCCAAAGGTTAGCTGTATTATGGATGATGACACCAAAAGCATGACTAGTGTGCAGTCGGAGCGAGTCCGGAGGAGGCACTCCATTGCTGGATCAATAGTGAGGGATGATGAAAGTCTTGCAAGCTCTCCAGCTGTTCCAAGTTACATGGTGCCAACTAAGTCTGCAAAAGCCAAGTCCAGGTTGCAAAGTCCATCAGCTGCAGAGAACAGTACTCCAGAAAAAGGGTCCTTTGGAAATGCAAAGAAACGGCTTAACTTCCCGGCTTCTCCTGCCAGATCATCAAGGCGGCATTCAGGCCCACCAAAGGTAGAAAGCAGCTTAAATGCAGAAATTACTGTTGGCAACGGCGTGGCTGTTTGA 1401 0.4418 MGKNKPNWFSNVKKALSPDSKQNKHQNSSGSKKKWFGKKKLNTSDSYPETDQAPPFHPPEAEEEIILTHVQNQNNHDHVEVVPDVDVDVPVPDVQIETVEVQAAPIVQVASKPNDEVAAIMIQTTFRRYLARRAFRALRGLNRLRALMEGPVVKRQAISTLRSMQTLGHVQSQIRSRRVRMLEETQALQKQLLQKHTKELEIQIGEEWDESIQSREQIEAKLLSKYEATMRRERAMAYSFTHQKNGRNASKSINPMFMDPTNPSWGWSWLERWMAANQSLMEKENNSSAKSSIRGITSAEISKSFARFQLNSENHSPTASQNPGSPNFQSNSKPPKPAIVKKLNKASPKVSCIMDDDTKSMTSVQSERVRRRHSIAGSIVRDDESLASSPAVPSYMVPTKSAKAKSRLQSPSAAENSTPEKGSFGNAKKRLNFPASPARSSRRHSGPPKVESSLNAEITVGNGVAV* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2225 466 MobiDBLite consensus disorder prediction 10 25 - -
Mtr1g2225 466 Pfam IQ calmodulin-binding motif 118 136 IPR000048 GO:0005515
Mtr1g2225 466 PANTHER IQ-DOMAIN 5-RELATED 5 461 - -
Mtr1g2225 466 MobiDBLite consensus disorder prediction 313 339 - -
Mtr1g2225 466 MobiDBLite consensus disorder prediction 1 58 - -
Mtr1g2225 466 MobiDBLite consensus disorder prediction 403 423 - -
Mtr1g2225 466 MobiDBLite consensus disorder prediction 313 334 - -
Mtr1g2225 466 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 5 461 - -
Mtr1g2225 466 SMART iq_5 114 136 IPR000048 GO:0005515
Mtr1g2225 466 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
Mtr1g2225 466 MobiDBLite consensus disorder prediction 382 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2225 Mtr-Chr1 32634510 32638537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2225 1 465 IQD Protein Family AT5G03040 51.660 5.06e-132 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2225 - - gmx:100799058 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2225 1 32634510 32638537 Mtr1g2225 1 32634510 32638537 ECH
Mtr7g3064 7 47449769 47453583 Mtr1g2225 1 32634510 32638537 PCT